Gene detail

Detailed information of pred2_43153.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_43153.1	FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED	Sc3x4tf_318	1743110	1720569	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_43153.1

ATGGAACGAAGGACATTCAAATGTCCGCATTGCAGCAAAAGCTTTCACTGTTCGAGTCATCTGACCACTCACGTACGCACACACACAGGAGAGAAACCCTACCAATGTGGCCAGTGCCCAAAGTCATTTGCCCTGTTGGGCAATCTGACGGCTCACGTTCGCACACACACTGGAGAGAAGCCCTACACATGCAAGTATTGCGCCAAATCATTCACGCAGTCAACAAATCTCAATGTCCACATGCGAGTGCACACTGGAGAGAGGCCTTACAAGTGCCAGAGATGCCAAAAAGCATTCAAGACGAGTGGAGCTCTCAATGGTCATGCCAAGTCTTGCTGGAAATTTTCGGATATTGTCTCCAAACACTTACCAGGTTACCGACGCAGTGGTACTACAACTGTTTTGCGGACAAGCGCTCATGGTAATCCTGGAAGTAGAGGAAGAGGAATTGGGAAGTCAACAGTAGCGCTCGGCACAGAAAGAAGTCGACTCAGTTTGCCATCGTCTGGAACAATCTCCTCAAAGAATTCTTCACATGCTCCGAATGAGATCAACAACAGCCAGTTGTCTCTGAGTGGAAATGGTAACTGGCAAAGCTACCGCAAAAAGTTATCGGCTTTCTATAATAAAAAGCGAATGAATTTAGCCAGCCTGGTACACAGCAAATCAGTTAACAGGCCCCTGGGTACAAGCAGCTCCCCTGCAATGACTGCTGAAGTTCTGAGTGGTAATTCTAGTGTTGCGTCTTCTAGCAAGAGGTTGGACACAGCGATCAAACAAGAAGTTATATCAAATGCTTTAAATAATTACACAGAACCAAGTAGTAACCAAAAGAATCAACCTGAGAATCAAAAGACAGGCGGCACCCATCCTCTTTCTAGAACTGTGGACACCATTGTTACCTGGAACAAGGAGATGACACCTAACAAAATCATTAGTAGTAATAGTAGTGGGTTTGTTAACTCTTCAAATGTTTACAACACGATCGGCACCAACAGCTTGTCGAATACAGCTGATGGCTCATTCAGTTCTGCTGAAAACAAAAACTTTACCATTTCCACGGATTTTTCACAGCCGCCTCAAGTACGATCTGATAAGGGAAGCCTTACAATTGACTTTAACTCTGCGTCAGCATTAAGTAGGAACACAAATCAGCAATTGAATCCTCTTTTTCCTGTTATGGCTCAAAACAATAGAGTTTCTAGTTTGCTGCAAGTAACCAGACCCACCACAACTGCCTTAGATCAGGCACGAAGCAGCAAACTTCTAGCTGAAACATCTGTCGAAGATACTAACGCTTTGGCCACTATTCAATCAAATCTTTCTCTTCTCGCTAAAGGAAGCCTGGAAAAAAGTGTTTATATACCCTATGTACCCACTACTAATGCTGCTTATACTTCTCCAAATCGATCAACTTGTTTTGGCAGCGATAAAATTCCTCTTGAATCTCCTGTTGTTCTTCCATCACCTGCAGTGACCAGTAACCAAGTTATGGAAAAGAAGACTATAAGAAATTACTTTTCAGATAGACAGTTAAGACCTGGCTGTAGTGTTGGCGATAGTGGCCTCAACTCTACGTCAGATTCTTCTAGGACTATCAAACTGTATTCCAAAAACCTGCCTTACCAAAAACCAAATCCCTCCAAAATCTCTGATAATACATATTCCAGTTTTGTCGAGACCTCGATACTCGAAAAAGTGTTTAAATGCCGCTTGTGCGGCATGATCTTTGACAGGATGAATGAGTTTGTGTCGCACATGCCTCTACACGAAGAAGACGAGTTGCTTGTGTGTAAATTCTGCGAACTGGACTTTATGACACCCTTAGAGCTTGTCCTGCATATGAAGAGTCACGTACTGCCTCAGCAACTGTGTGAGCTATGTGACCAAATGGTTCTGTCGACACGTTTCGCTGCCCATCTCAGTATGCACGCTGCCTCGATGAAGAAGATGAAAAACCAAACCAGAACGTTTTGGTGTCGGTTTTGTGATAAAACCTTTAATCAGCAGGCATACCTTGACCTCCACCTGAGAGTCCATGCTAGCCAGAAACCAATTCATTTTAATTCTAATCACCCGAATACAACCGTGATGCCAGAACCGGCATTGAGCAATCAAAAATCGGACGGCAGCATTTCTACCCAGAAAGTCTTTTCCTGTTCGTATTGCAAGAAAGAATTCCAGAATTCCAAAAATCTCATCATCCACATCCGCTCTCATGCAGTTAGTAACCCACATAAATGTAAAAAATGCCACCAAATATTTAAAAATATGATTACTTATAATACACACAAAAGATCCTGCTTTCAAGACCAAAAAAATGAACCACAAGAATTTTTTCCATCATTATCTCCCACTACTGCTACTACTATTACTACCATTATTGCTTCAGTGACTGGGAGAAGCACTGGTGGAACATATGAAGAGAAAATGGAATGTGATAAAATGTCTTTAGAAAATGACTCTGAGAAATTAGACGACAGTCTTGTAGAAGAGAAAAAAAAATGCTTTTTATGCTCTGAAGAATTTCTCACAAAGTCTGCTCTGTCACAGCACTTGCAATGTGCACATGATACAAGTGAGTTAGCATGTAGAATCTGTGGTAAGACATTTGCTGAAGTTGATGAGTGCATCGAGCATGTTGACTATTGTAAGTCTTCATCAACTGTTCAGGTGAAGTGTGAGTTTTGCAATGACAGTTTTGCCTCAGTTTCTGACTACAAGCAGCACAAAGACCAACAACATGGCCCCAGTTGCTCAGACGTGGCTAAAAGCAGCAATCAACTTATCGACAAAAAGGACATTAACCTAGGCAACACTGCACAGAAAAACTCATCCTTAGATATAATCAGCTGCAAGATCTGCAGCAAACAATTCACCAAACTGTATAGCCTTTCAGTGCATATGCGCACTCACCATACGCAAAGGAGCATTAACTTAAACAAGTGCAGGTACTGCGAGCGCACTTTTACATCAATGTCCCACTTATATGTTCATCACATGAAGGCTCATGATCGGTCGCAATCGCTTCGACTATCTACAGACATGTTACCCTCAACATCAGGAGACGTTAATCTTCAGTCAAATTCTTCACCGGCCTTTGATTCATTGTCATCTTCTATGGACCAAACTTACACTGACCAGCAACAGCAGCATTTATTTAAAATACAAACTACTACTATGGACCAATTCCTTCAGTCAAATTTCTCCGACAACAATGCAGAAGATTCCAAGACCCAACTAATACAGTGCAAACTGTGCCCCAAACGATTTACCAAATTCTACAGCCTCGCCGTCCATATGAAAACTCACTCTCAGCAGCCACAGCAACAGCAGCCGCAGCAGCAACCACAGCCGCAGCCGCAGCAGCAGCATCAGACGTGCAAGATCTGCATAAATCCTGATGCCTTTCTCACTGCTGACGACCTCAATGAGCACCGGAAGAAGGACCATTGTGAGTTCCCGTGCAACTTTTGCAATAAGATCTGTCACAGTTCTTCGCAGCTGGATACACACCTACGCACACACACTGGAGAGAAACCATTTTGTTGCCCTCACTGCCCCAAAACATTTGCTGTCAACTGTAACCTGATTGCTCACGTGCGTATCCACACAGGAGAGAAACCCTTTCGTTGCCAATACTGTGACAAATCATTCACCCAGGCCACCAACCTTAATGTTCATACACGTATACACACTGGTGAAAGACCCTACAATTGTAACAGGTGCAAGAGAGCATTTAGAACATCTAGTGCTCTCAAGGGACACGTTAAAAAGTGGAAAAATGTTGAAATTGTCGTCTGCTTCTTTGACTTTAAATTCGCCGCCATCAGCAACAGCGTAGGACTTCAGGTGATTCCGGAATCAGAACAGCTGAAGCAGCGGCCATATGGAAACGGGAAAGATTTGAACATGGCGGAGATAACATCAACGACACCGATATGCGTTGCGCTTTCGGCAAAATATAAATCATCTTTCGCATATATCACTATCAAGGACAGGTTACCTGTGATATTAAGCAAGATAGCTGATAGCCTGTATAGAAATAAAGAAAAGATACGTGCTCAGTACGGAGATGAGGGCGGTGATGAACTGAAGACGTTGATCGGACAGGTATCAAAGCTTCGCAACGAGTTACAAACCAACAAGCCGATTCTACCCTTAACAGATTCTGATTCAGAACCCGATGTGATTGATTGGAATAATTACCTGAAAGCTGAGAAAGAACGGTCGAATGGAGAGGACCCGGCATGGTTTAATAATCCTTGGCTCTATGTCGAATGTTATATGTACAGGAGGATCCAGGAGGGAGTCAACCTGACCAAAACCCTAAAGCAAGTAGACGTCTTTCAAGATCAGAAAGAGGAAGCATTTTTGTCGTCCCAATTTGCAATAGAAGCGCTATTGACCTTTTTGGATGATTACATATCTGATAAGAAAACAATCACTGATAATGCGTCAGTGGAAAGTGCCTTATCCAAATTTCTCCGCTTTTCCCTTTGGGGAAACAAATGCGATCTTTCTATATCGGCTGGATTTGAAAATTCTCAGACACAGAGTCCAGTAAGTTCATTGGAAAAACTAGAATCCAATATTCTCATTGATAACACAGAAAATATTTGGATTTTGTTAAATCAACTCAAAAAGGAGAAAAAATGTCCTTTAAAAATAGACATAATTTTAGATAATGCTGGGTATGAAGTACTTACAGATTTCTGTTTGGCCGAGTTTCTCCTTGTCTCTGGCTTAGCCGGGTGTGTCCATTTTCATGGTAAGAACTTCCCTTGGTTTGTTTCTGATGTGACCCCCAGAGACTTCAAATGGACACTGGACACATTGGCTGCTTCATCAAACAGCGTTTGTGCCTCTTTTGGAGAGAAATGGAAACAACACATTGCTGATCGCAGTTGGAGATTTTCCACCCATAAATTTTGGACCGTGCCTCATGACTTTAATGAAATGAAAAACGGGTTTCCCGATTTGTTTGAGCAACTTGCCACGAGTGATTTTCTAATCTTCAAAGGAGATCTTAACTATCGGAAGTTAGTCGGGGACATTAACTGGGAAATGACAACTCCGTTTTCCAAAAGTATCCGAGACTTTCACCCAACTCCACTGTGTTCGCTAAGGACAATAAAGTCAGACACAGTAGCCGGGCTCGAGGCAGGGGTGGCCGAACGAGTGGCCAAGGAAGACCCTAATTGGTTGATCAATGGAAGCTGGGGGTTAATTTGCCTTTCTCAAAATGTATCC

Transcript

pred2_43153.1

ATGGAACGAAGGACATTCAAATGTCCGCATTGCAGCAAAAGCTTTCACTGTTCGAGTCATCTGACCACTCACGTACGCACACACACAGGAGAGAAACCCTACCAATGTGGCCAGTGCCCAAAGTCATTTGCCCTGTTGGGCAATCTGACGGCTCACGTTCGCACACACACTGGAGAGAAGCCCTACACATGCAAGTATTGCGCCAAATCATTCACGCAGTCAACAAATCTCAATGTCCACATGCGAGTGCACACTGGAGAGAGGCCTTACAAGTGCCAGAGATGCCAAAAAGCATTCAAGACGAGTGGAGCTCTCAATGGTCATGCCAAGTCTTGCTGGAAATTTTCGGATATTGTCTCCAAACACTTACCAGGTTACCGACGCAGTGGTACTACAACTGTTTTGCGGACAAGCGCTCATGGTAATCCTGGAAGTAGAGGAAGAGGAATTGGGAAGTCAACAGTAGCGCTCGGCACAGAAAGAAGTCGACTCAGTTTGCCATCGTCTGGAACAATCTCCTCAAAGAATTCTTCACATGCTCCGAATGAGATCAACAACAGCCAGTTGTCTCTGAGTGGAAATGGTAACTGGCAAAGCTACCGCAAAAAGTTATCGGCTTTCTATAATAAAAAGCGAATGAATTTAGCCAGCCTGGTACACAGCAAATCAGTTAACAGGCCCCTGGGTACAAGCAGCTCCCCTGCAATGACTGCTGAAGTTCTGAGTGGTAATTCTAGTGTTGCGTCTTCTAGCAAGAGGTTGGACACAGCGATCAAACAAGAAGTTATATCAAATGCTTTAAATAATTACACAGAACCAAGTAGTAACCAAAAGAATCAACCTGAGAATCAAAAGACAGGCGGCACCCATCCTCTTTCTAGAACTGTGGACACCATTGTTACCTGGAACAAGGAGATGACACCTAACAAAATCATTAGTAGTAATAGTAGTGGGTTTGTTAACTCTTCAAATGTTTACAACACGATCGGCACCAACAGCTTGTCGAATACAGCTGATGGCTCATTCAGTTCTGCTGAAAACAAAAACTTTACCATTTCCACGGATTTTTCACAGCCGCCTCAAGTACGATCTGATAAGGGAAGCCTTACAATTGACTTTAACTCTGCGTCAGCATTAAGTAGGAACACAAATCAGCAATTGAATCCTCTTTTTCCTGTTATGGCTCAAAACAATAGAGTTTCTAGTTTGCTGCAAGTAACCAGACCCACCACAACTGCCTTAGATCAGGCACGAAGCAGCAAACTTCTAGCTGAAACATCTGTCGAAGATACTAACGCTTTGGCCACTATTCAATCAAATCTTTCTCTTCTCGCTAAAGGAAGCCTGGAAAAAAGTGTTTATATACCCTATGTACCCACTACTAATGCTGCTTATACTTCTCCAAATCGATCAACTTGTTTTGGCAGCGATAAAATTCCTCTTGAATCTCCTGTTGTTCTTCCATCACCTGCAGTGACCAGTAACCAAGTTATGGAAAAGAAGACTATAAGAAATTACTTTTCAGATAGACAGTTAAGACCTGGCTGTAGTGTTGGCGATAGTGGCCTCAACTCTACGTCAGATTCTTCTAGGACTATCAAACTGTATTCCAAAAACCTGCCTTACCAAAAACCAAATCCCTCCAAAATCTCTGATAATACATATTCCAGTTTTGTCGAGACCTCGATACTCGAAAAAGTGTTTAAATGCCGCTTGTGCGGCATGATCTTTGACAGGATGAATGAGTTTGTGTCGCACATGCCTCTACACGAAGAAGACGAGTTGCTTGTGTGTAAATTCTGCGAACTGGACTTTATGACACCCTTAGAGCTTGTCCTGCATATGAAGAGTCACGTACTGCCTCAGCAACTGTGTGAGCTATGTGACCAAATGGTTCTGTCGACACGTTTCGCTGCCCATCTCAGTATGCACGCTGCCTCGATGAAGAAGATGAAAAACCAAACCAGAACGTTTTGGTGTCGGTTTTGTGATAAAACCTTTAATCAGCAGGCATACCTTGACCTCCACCTGAGAGTCCATGCTAGCCAGAAACCAATTCATTTTAATTCTAATCACCCGAATACAACCGTGATGCCAGAACCGGCATTGAGCAATCAAAAATCGGACGGCAGCATTTCTACCCAGAAAGTCTTTTCCTGTTCGTATTGCAAGAAAGAATTCCAGAATTCCAAAAATCTCATCATCCACATCCGCTCTCATGCAGTTAGTAACCCACATAAATGTAAAAAATGCCACCAAATATTTAAAAATATGATTACTTATAATACACACAAAAGATCCTGCTTTCAAGACCAAAAAAATGAACCACAAGAATTTTTTCCATCATTATCTCCCACTACTGCTACTACTATTACTACCATTATTGCTTCAGTGACTGGGAGAAGCACTGGTGGAACATATGAAGAGAAAATGGAATGTGATAAAATGTCTTTAGAAAATGACTCTGAGAAATTAGACGACAGTCTTGTAGAAGAGAAAAAAAAATGCTTTTTATGCTCTGAAGAATTTCTCACAAAGTCTGCTCTGTCACAGCACTTGCAATGTGCACATGATACAAGTGAGTTAGCATGTAGAATCTGTGGTAAGACATTTGCTGAAGTTGATGAGTGCATCGAGCAtgttgactattGTAAGTCTTCATCAACTGTTCAGGTGAAGTGTGAGTTTTGCAATGACAGTTTTGCCTCAGTTTCTGACTACAAGCAGCACAAAGACCAACAACATGGCCCCAGTTGCTCAGACGTGGCTAAAAGCAGCAATCAACTTATCGACAAAAAGGACATTAACCTAGGCAACACTGCACAGAAAAACTCATCCTTAGATATAATCAGCTGCAAGATCTGCAGCAAACAATTCACCAAACTGTATAGCCTTTCAGTGCATATGCGCACTCACCATACGCAAAGGAGCATTAACTTAAACAAGTGCAGGTACTGCGAGCGCACTTTTACATCAATGTCCCACTTATATGTTCATCACATGAAGGCTCATGATCGGTCGCAATCGCTTCGACTATCTACAGACATGTTACCCTCAACATCAGGAGACGTTAATCTTCAGTCAAATTCTTCACCGGCCTTTGATTCATTGTCATCTTCTATGGACCAAACTTACACTGACCAGCAACAGCAGCATTTATTTAAAATACAAACTACTACTATGGACCAATTCCTTCAGTCAAATTTCTCCGACAACAATGCAGAAGATTCCAAGACCCAACTAATACAGTGCAAACTGTGCCCCAAACGATTTACCAAATTCTACAGCCTCGCCGTCCATATGAAAACTCACTCTCAGCAGCCACAGCAACAGCAGCCGCAGCAGCAACCACAGCCGCAGccgcagcagcAGCATCAGACGTGCAAGATCTGCATAAATCCTGATGCCTTTCTCACTGCTGACGACCTCAATGAGCACCGGAAGAAGGACCATTGTGAGTTCCCGTGCAACTTTTGCAATAAGATCTGTCACAGTTCTTCGCAGCTGGATACACACCTACGCACACACACTGGAGAGAAACCATTTTGTTGCCCTCACTGCCCCAAAACATTTGCTGTCAACTGTAACCTGATTGCTCACGTGCGTATCCACACAGGAGAGAAACCCTTTCGTTGCCAATACTGTGACAAATCATTCACCCAGGCCACCAACCTTAATGTTCATACACGTATACACACTGGTGAAAGACCCTACAATTGTAACAGGTGCAAGAGAGCATTTAGAACATCTAGTGCTCTCAAGGGACACGTTAAaaagtggaaaaatgttgaaaTTGTCGTCTGCTTCTTTGACTTTAAATTCGCCGCCATCAGCAACAGCGTAGGACTTCAGGTGATTCCGGAATCAGAACAGCTGAAGCAGCGgccatatggaaacgggaaagATTTGAACATGGCGGAGATAACATCAACGACACCGATATGCGTTGCGCTTTCGGCAAAATATAAATCATCTTTCGCATATATCACTATCAAGGACAGGTTACCTGTGATATTAAGCAAGATAGCTGATAGCCTGTATAGAAATAAAGAAAAGATACGTGCTCAGTACGGAGATGAGGGCGGTGATGAACTGAAGACGTTGATCGGACAGGTATCAAAGCTTCGCAACGAGTTACAAACCAACAAGCCGATTCTACCCTTAACAGATTCTGATTCAGAACCCGATGTGATTGATTGGAATAATTACCTGAAAGCTGAGAAAGAACGGTCGAATGGAGAGGACCCGGCATGGTTTAATAATCCTTGGCTCTATGTCGAATGTTATATGTACAGGAGGATCCAGGAGGGAGTCAACCTGACCAAAACCCTAAAGCAAGTAGACGTCTTTCAAGATCAGAAAGAGGAAGCATTTTTGTCGTCCCAATTTGCAATAGAAGCGCTATTGACCTTTTTGGATGATTACATATCTGATAAGAAAACAATCACTGATAATGCGTCAGTGGAAAGTGCCTTATCCAAATTTCTCCGCTTTTCCCTTTGGGGAAACAAATGCGATCTTTCTATATCGGCTGGATTTGAAAATTCTCAGACACAGAGTCCAGTAAGTTCATTGGAAAAACTAGAATCCAATATTCTCATTGATAACACAGAAAATATTTGGATTTTGTTAAATCAACTCAAAAAGGAGAAAAAATGTCCTTTAAAAATAGACATAATTTTAGATAATGCTGGGTATGAAGTACTTACAGATTTCTGTTTGGCCGAGTTTCTCCTTGTCTCTGGCTTAGCCGGGTGTGTCCATTTTCATGGTAAGAACTTCCCTTGGTTTGTTTCTGATGTGACCCCCAGAGACTTCAAATGGACACTGGACACATTGGCTGCTTCATCAAACAGCGTTTGTGCCTCTTTTGGAGAGAAATGGAAACAACACATTGCTGATCGCAGTTGGAGATTTTCCACCCATAAATTTTGGACCGTGCCTCATGACTTTAATGAAATGAAAAACGGGTTTCCCGATTTGTTTGAGCAACTTGCCACGAGTGATTTTCTAATCTTCAAAGGAGATCTTAACTATCGGAAGTTAGTCGGGGACATTAACTGGGAAATGACAACTCCGTTTTCCAAAAGTATCCGAGACTTTCACCCAACTCCACTGTGTTCGCTAAGGACAATAAAGTCAGACACAGTAGCCGGGCTCGAGGCAGGGGTGGCCGAACGAGTGGCCAAGGAAGACCCTAATTGGTTGATCAATGGAAGCTGGGGGTTAATTTGCCTTTCTCAAAATGTATCCTGA

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF01937	ARMT1-like_dom	Damage-control phosphatase ARMT1-like domain	Domain	Interproscan
PF13894	zf-C2H2_4	C2H2-type zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002791	Domain	Damage-control phosphatase ARMT1-like, metal-binding domain	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036075	Homologous_superfamily	Damage-control phosphatase ARMT1-like, metal-binding domain superfamily	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR050752	Family	C2H2-type zinc-finger domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24384	FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-