Gene detail

Detailed information of pred2_43132.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_43132.1	HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG	Sc3x4tf_318	520976	428346	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_43132.1

ATGGAGCTTGATGATTGTTTTTTCTTTGGAGTTCAGAAATGGAATAACAATGATATTAGATCCCAAAATCACAAGACAGATTTTCAAAGTAGAATCCCTAGAGCTCCATCAGTCGATAATCTTCTCTTACTGGATTCTGTCAAAAGTAATGACATTCTACCAACTGCCTCTCAAATGATGTTTGATTTTTCAACTCCAGTTACTCCCACCCAAATTGAGAATTCTCATCTACTCAAAACCAGCCAAACAAAGAGATCTCAAATCAATCACATATCTGCCAAACCCACACAAGAAGAACAGTTTACGGGGCCAAGAAAAAGATCAATAAATAAAGATCGATCAAATGTTCCTAGTGCTCCAGGCTACAAAAAACTGTTCAATATTCCCTATAAAAACCAATCTCAAATTGATCCTCAAGAAAACATTGCTTTATCTCAGTTTCAACAAAATCATTCAAACATTTTGGAAAAAAGAAACTTTAGTGCTGATGATGATCTCTTTGAAGATATGAATCCATGCCAATTTCAAAAAGAAGTGGCTCCAATAAAAGCTTTATGCAGTGAACGCTATCAAGATTGGCAACTAAAATTAGAAGATTTGGGAATCCATTGTTTGGAACTGACAGGAGATACAGAATTGGATGACTGCTCAATAATACAGACTACTAACATCATCATTACCACACCTGAAAAGTGGGATAGTGTGACTCGAAGATGGCATTGTGATAATACCTTGATTCAGAATTTGCAACTTTTCATGATTGATGAGGTGCATACCTTGAATGATAGTCAAAGAGGTGCAACAATGGAAGCTGTTATCAGCAGAATGAAAACAATCCATGTTGCATCTAAATGGCTCTCTTCGAACCAAAATAAAGTAAAAAATAGCATTCGATTTATTGCAGTCTCTGCTACAATTCCAAACCTTCTGGATTTCTGTTCTACAAGGAAAGGTGTCATCCAGACAGCGGATATGCTCTGTAAACATGGAAAATTTGTCAACTCTGCAGAAATGAGGAAAGTTCTTTACCAATGTGCAAATCTTTTAAAGGATTCAAAACTTAGAGTGGCTACTACAACTCTTGCTATGGGAGTAAACCTTCCTGCTCATTTAGTGATTGTCATGTCTACACAACACTATGTATTGGGAAATCACCAAGAATATTCTGAATCTCAGATATTGCAAATGATTGGACGAGCTGGACGACCACAGCAAAAATATGAAATGCTTTTGGATGGAAAGCAGTTGATTGAAAGCAGCCTTCATAAGAATTTGATCGAACATTTGAATGCTGAGATTTTCCTCAATACAATCAAGGACATTAGTGTGGCTGTTGAATGGATTAAACATACATTCCTTTATATCAGAGTAAGAAAGAATCCAACATTTTATGATCTTTGCCTTAGAAACCTTAATAACTTGGCCAGTATTGACTTAATCAAATTGGATGAAGACAATTTTGATATAAAACCATTAGACTTAGGCAAACTAATGGCCAGATACTGCATTGCTTTTGACACAATGAAAAGAATGAGTAAAGTAACTGGTTCAGAAGATATAAATGAACTGTTGAATTTACTTGCTGGAAGTTCAGAATTCAAGGATATTCAGCTGAGAATAAATGAAAAGAAAATGCTCAACTCATTAAATAAAGATAAAACTAAAGCAACTATCAGAACCAAATCTATTTATGATTCATTTTCAATAATGTTAAGTCTGCTGCATCCTCTTACTGGCACCCGGCCGGCAACCTCGGTCACTGCCTCCCACCTCCTCTTTATGACTGCTAAGGGGCTAGCTGCTGTTAGACTCAGGGTCAGACTGGAAGTCTGCTGGCAGACATGCTTGTTAGAAATTTTGTGGCTGAAAGACTCTTACAATGGACTTCTCAGTGCAGTTTATCTCTACAAATGTTTTCGTGCAAAGATTTGGGAAAATTCAAAATATGTCACCAAACAACTTGATGGAATTGGCCAGTTTCTTTCAAATGCATTATTCAATTCTGGAATCACCACATTTGAGATGTTTGAACGCACTGATCCAAGAGAAATAGAAATGAATCCTATTTGTGGCAAACCTTATGCCGAAATTGAAATCCACTTGAATATTTCAAATAGTGATCAAGTGAAAGAGAACTCTCTGCTACCAGACACTCATACTTGTGCATTGATCATTGCCAATGCTGATAACCAAGTCATTTACAAAAGAAAAATTATGGATAGGAATTTGCTGAATGAAAATGAATTTTCAAAGCTGTTCAATGTGAAGAAAGCAAATAATGGAGAAGAAATATACATCAATCTAATCAGCTTTGATTGGGTTGGCATTGATATTGTGGCTTCTTTCAAGCCAATATTTCTAAAAGATGAAACCAATAGAGAAAGGGTGATCAATTTTGATGAAACCAACAGAGAAAAGGTCCGACAATGGTACGGCTATGGTGGTGCAGTTGGGAATATACTTCCTGTAAAAGTTTACCAGCCCCAGGAACGCTTTGACTTGTCTCTTGGTTTGGGGTCTCTTGGCTTCACTGATTGCCTCAATCCCCTCTTCTCCTGGACCAACATGTTCGTCCCAGAGCTTGTGTCCCAAGAAATGTATCTCTTGGAACCCCAACTCGCATATGGAGGGTCAAAGTATAACACTAGTTGTCAGCATCGATGTCACAACAAAAAAGAATGTGCTCACCAATGCTGCAAAGTTGGTTTCAGAAATGCAGGAATATCACAGAAAAAAAAGCAAATATCTAAAAGAAATTCTGTAACTCCTCGAAGCCAGCTTCCTAAAAGCAAAATATCCACCGGTCAGAACAGCCTACATTGTTATATTGATGGCCTGAGGGAAAAAATGCGGAACATTACAGATACACCAACGGTGAAGCGCTTAAAGGCTCCCAATGAAACACAGACAGTGATTGATCTTAAGAAATTTGCTTTTTGTCCAAAACCCAAAATAAGTACTGATGCTGTTACTACTGATCATACTGCACCTCTCACCATTACACCTATTACCCCTTTGGTGAGGCCTGAATCAAATGACAATAGAAAGATGTCTTTGTCTACAACTCCAAATGGCTGGAACAATCTGGATATTTATCACAAGACAAGAGAAAATTTTGCATATGAGCCTGGAGAAATACCAATCTTAAATGAATCTCCCAATGAAGAACTCTATGGAGACTTTTCTCTTGAACTGCCAATATTGGCTCAACCATTTAACAAAACAAATGACTTTCTTCCCTCTGAAACTAACACATTCTATAAAAGTGAAGATCCTTCGCAGAGACAACCCACCAGTCAGTCACATCAGCAACATAAATATGGCCAGGTGGTCGCTTGGCTCTCTCAGGATTCCCCCAGACATCCTTTCCAGAAAAGCAGTAACAGTCAACATGATTTTGGCAGAATTTCTTCTGAAACACTCACAAATGAGTTTAAACTTGGACAACCTGAGAGAATGAATGACCCGATTGTTGCCCCAAATCAGGGTATATTTTGTTCAGCACAAGAACTTCAGAATCGTGTAGTGCAGGAGGGAGAAAGAGGTGCTTGTGGAGAAGTTAAACTTGGCTTTTCAAAAGGAACCTGTAACAAATTTGCTGTAAAAATAATTCCCAAAAAGAGGTTTTCTTTAAGTGATAGAGTGCAGATACCTTGCATTATTGGTGTTGAAGAAATCATTGATACTCCTGAAAATTTGTTCATTGTTCTTGAGCTCGTTGAAGGTGGTGAACTTTTTGATCGAATAACTTCAATGGGACAGCTAAAAGAAGAGAATGCAAAACTGTTTTTCTACCAAATGGTAAATGCTGTCAAGTATCTCCATGACGTAGGAATCACACACCGTGATTTGAAAGTAACTGACTTTGGTCTTTCTAAATTCTTTGATGCTGGAAGTATATTGAAGACCTTTTGTGGCACACCTACATATGTTGCTCCTGAAGTGCTTTCCTCCGCTGGCCGTGGTACATACACGAAAGCAATTGACTGCTGGAGTCTGGGAGTCATTCTCTTTGTCTGCCTGGTTGGTTACCCACCATTTTCAGAAGACCGAAAGGATAAGAATCTCCGAGAACAAATTCTTGGTGGACATTATTCCTTCCCAAATCAATACTGGAAAGACATCTCACCTGATGCTATTGACCTTGTGAAAAAACTTATGACCGTGAATCCATCAAACCGAATCACATTGAAAGAAACATTAGAACATCCATGGCTTAAGAATGATGATGCTGTTATCAAGAAAGCTTATCAACTTATGTACCCAAATACAAATGGCAACTGCAATTCAACATCGGATGTGAGTAGAAATATT

Transcript

pred2_43132.1

ATGGAGCTTGATGATTGTTTTTTCTTTGGAGTTCAGAAATGGAATAACAATGATATTAGATCCCAAAATCACAAGACAGATTTTCAAAGTAGAATCCCTAGAGCTCCATCAGTCGATAATCTTCTCTTACTGGATTCTGTCAAAAGTAATGACATTCTACCAACTGCCTCTCAAATGATGTTTGATTTTTCAACTCCAGTTACTCCCACCCAAATTGAGAATTCTCATCTACTCAAAACCAGCCAAACAAAGAGATCTCAAATCAATCACATATCTGCCAAACCCACACAAGAAGAACAGTTTACGGGGCCAAGAAAAAGATCAATAAATAAAGATCGATCAAATGTTCCTAGTGCTCCAGGCTACAAAAAACTGTTCAATATTCCCTATAAAAACCAATCTCAAATTGATCCTCAAGAAAACATTGCTTTATCTCAGTTTCAACAAAATCATTCAAACATTTTGGAAAAAAGAAACTTTAGTGCTGATGATGATCTCTTTGAAGATATGAATCCATGCCAATTTCAAAAagaagTGGCTCCAATAAAAGCTTTATGCAGTGAACGCTATCAAGATTGGCAACTAAAATTAGAAGATTTGGGAATCCATTGTTTGGAACTGACAGGAGATACAGAATTGGATGACTGCTCAATAATACAGACTACTAACATCATCATTACCACACCTGAAAAGTGGGATAGTGTGACTCGAAGATGGCATTGTGATAATACCTTGATTCAGAATTTGCAACTTTTCATGATTGATGAGGTGCATACCTTGAATGATAGTCAAAGAGGTGCAACAATGGAAGCTGTTATCAGCAGAATGAAAACAATCCATGTTGCATCTAAATGGCTCTCTTCGAACCAAAATAAAGTAAAAAATAGCATTCGATTTATTGCAGTCTCTGCTACAATTCCAAACCTTCTGGATTTCTGTTCTACAAGGAAAGGTGTCATCCAGACAGCGGATATGCTCTGTAAACATGGAAAATTTGTCAACTCTGCAGAAATGAGGAAAGTTCTTTACCAATGTGCAAATCTTTTAAAGGATTCAAAACTTAGAGTGGCTACTACAACTCTTGCTATGGGAGTAAACCTTCCTGCTCATTTAGTGATTGTCATGTCTACACAACACTATGTATTGGGAAATCACCAAGAATATTCTGAATCTCAGATATtgcaaatgattggacgagctggacgaccacagCAAAAATATGAAATGCTTTTGGATGGAAAGCAGTTGATTGAAAGCAGCCTTCATAAGAATTTGATCGAACATTTGAATGCTGAGATTTTCCTCAATACAATCAAGGACATTAGTGTGGCTGTTGAATGGATTAAACATACATTCCTTTATATCAGAGTAAGAAAGAATCCAACATTTTATGATCTTTGCCTTAGAAACCTTAATAACTTGGCCAGTATTGACTTAATCAAATTGGATGAAGACAATTTTGATATAAAACCATTAGACTTAGGCAAACTAATGGCCAGATACTGCATTGCTTTTGACACAATGAAAAGAATGAGTAAAGTAACTGGTTCAGAAGATATAAATGAACTGTTGAATTTACTTGCTGGAAGTTCAGAATTCAAGGATATTCAGCTGAGAATAAATGAAAAGAAAATGCTCAACTCATTAAATAAAGATAAAACTAAAGCAACTATCAGAACCAAATCTATTTATGATTCATTTTCAATAATGTTAAGTCTGCTGCATCCTCTTACTGGCACCCGGCCGGCAACCTCGGTCACTGCCTCCCACCTCCTCTTTATGACTGCTAAGGGGCTAGCTGCTGTTAGACTCAGGGTCAGACTGGAAGTCTGCTGGCAGACATGCTTGTTAGAAATTTTGTGGCTGAAAGACTCTTACAATGGACTTCTCAGTGCAGTTTATCTCTACAAATGTTTTCGTGCAAAGATTTGGGAAAATTCAAAATATGTCACCAAACAACTTGATGGAATTGGCCAGTTTCTTTCAAATGCATTATTCAATTCTGGAATCACCACATTTGAGATGTTTGAACGCACTGATCCAAGAGAAATAGAAATGAATCCTATTTGTGGCAAACCTTATGCCGAAATTGAAATCCACTTGAATATTTCAAATAGTGATCAAGTGAAAGAGAACTCTCTGCTACCAGACACTCATACTTGTGCATTGATCATTGCCAATGCTGATAACCAAGTCATTTACAAAAGAAAAATTATGGATAGGAATTTGCTGAATGAAAATGAATTTTCAAAGCTGTTCAATGTGAAGAAAGCAAATAATGGAGAAGAAATATACATCAATCTAATCAGCTTTGATTGGGTTGGCATTGATATTGTGGCTTCTTTCAAGCCAATATTTCTAAAAGATGAAACCAATAGAGAAAGGGTGATCAATTTTGATGAAACCAACAGAGAAAAGGTCCGACAATGGTACGGCTATGGTGGTGCAGTTGGGAATATACTTCCTGTAAAAGTTTACCAGCCCCAGGAACGCTTTGACTTGTCTCTTGGTTTGGGGTCTCTTGGCTTCACTGAttgcctcaatcccctcttctcctggaccaacatgttcgtcccagagcttgtgtcccaagaaatgtatctcttggaaccccaactcgcatatggagggtcaaagtATAACACTAGTTGTCAGCATCGATGTCACAACAAAAAAGAATGTGCTCACCAATGCTGCAAAGTTGGTTTCAGAAATGCAGGAATATCACAGAAAAAAAAGCAAATATCTAAAAGAAATTCTGTAACTCCTCGAAGCCAGCTTCCTAAAAGCAAAATATCCACCGGTCAGAACAGCCTACATTGTTATATTGATGGCCTGAGGGAAAAAATGCGGAACATTACAGATACACCAACGGTGAAGCGCTTAAAGGCTCCCAATGAAACACAGACAGTGATTGATCTTAAGAAATTTGCTTTTTGTCCAAAACCCAAAATAAGTACTGATGCTGTTACTACTGATCATACTGCACCTCTCACCATTACACCTATTACCCCTTTGGTGAGGCCTGAATCAAATGACAATAGAAAGATGTCTTTGTCTACAACTCCAAATGGCTGGAACAATCTGGATATTTATCACAAGACAAGAGAAAATTTTGCATATGAGCCTGGAGAAATACCAATCTTAAATGAATCTCCCAATGAAGAACTCTATGGAGACTTTTCTCTTGAACTGCCAATATTGGCTCAACCATTTAACAAAACAAATGACTTTCTTCCCTCTGAAACTAACACATTCTATAAAAGTGAAGATCCTTCGCAGAGACAACCCACCAGTCAGTCACATCAGCAACATAAATATGGCCAGGTGGTCGCTTGGCTCTCTCAGGATTCCCCCAGACATCCTTTCCAGAAAAGCAGTAACAGTCAACATGATTTTGGCAGAATTTCTTCTGAAACACTCACAAATGAGTTTAAACTTGGACAACCTGAGAGAATGAATGACCCGATTGTTGCCCCAAATCAGGGTATATTTTGTTCAGCACAAGAACTTCAGAATCGTGTAGTGCAGGAGGGAGAAAGAGGTGCTTGTGGAGAAGTTAAACTTGGCTTTTCAAAAGGAACCTGTAACAAATTTGCTGTAAAAATAATTCCCAAAAAGAGGTTTTCTTTAAGTGATAGAGTGCAGATACCTTGCATTATTGGTGTTGAAGAAATCATTGATACTCCTGAAAATTTGTTCATTGTTCTTGAGCTCGTTGAAGGTGGTGAACTTTTTGATCGAATAACTTCAATGGGACAGCTAAAAGAAGAGAATGCAAAACTGTTTTTCTACCAAATGGTAAATGCTGTCAAGTATCTCCATGACGTAGGAATCACACACCGTGATTTGAAAGTAACTGACTTTGGTCTTTCTAAATTCTTTGATGCTGGAAGTATATTGAAGACCTTTTGTGGCACACCTACATATGTTGCTCCTGAAGTGCTTTCCTCCGCTGGCCGTGGTACATACACGAAAGCAATTGACTGCTGGAGTCTGGGAGTCATTCTCTTTGTCTGCCTGGTTGGTTACCCACCATTTTCAGAAGACCGAAAGGATAAGAATCTCCGAGAACAAATTCTTGGTGGACATTATTCCTTCCCAAATCAATACTGGAAAGACATCTCACCTGATGCTATTGACCTTGTGAAAAAACTTATGACCGTGAATCCATCAAACCGAATCACATTGAAAGAAACATTAGAACATCCATGGCTTAAGAATGATGATGCTGTTATCAAGAAAGCTTATCAACTTATGTACCCAAATACAAATGGCAACTGCAATTCAACATCGGATGTGAGTAGAAATATTTGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF02889	Sec63	Sec63 Brl domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR004179	Domain	Sec63 domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR052247	Family	Meiotic Crossover Helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47835	HFM1, ATP DEPENDENT DNA HELICASE HOMOLOG	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-