Detailed information of pred2_42088.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_42088.1DNA2/NAM7 HELICASE FAMILYSc3x4tf_10821306392174406+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-CCCH

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00642zf-CCCHZinc finger C-x8-C-x5-C-x3-H type (and similar)FamilyInterproscan
PF07145PAM2Ataxin-2 C-terminal regionMotifInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR009818DomainAtaxin-2, C-terminalInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0035194Biological Processregulatory ncRNA-mediated post-transcriptional gene silencingInterproscan
GO:0043186Cellular ComponentP granuleInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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