Detailed information of pred2_38708.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_38708.1UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEINSc3x4tf_261.143124854314651+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09765FANCL_d1FANCL UBC-like domain 1DomainInterproscan
PF11793FANCL_CFANCL C-terminal domainDomainInterproscan
PF18890FANCL_d2FANCL UBC-like domain 2DomainInterproscan
PF18891FANCL_d3FANCL UBC-like domain 3DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001841DomainZinc finger, RING-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR016135Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR019162DomainFanconi anemia complex, subunit FancL, WD-repeat containing domainInterproscan
IPR026848FamilyE3 ubiquitin-protein ligase FANCLInterproscan
IPR026850DomainFANCL C-terminal domainInterproscan
IPR043003Homologous_superfamilyFANCL, UBC-like domain 3 superfamilyInterproscan
IPR043898DomainFANCL, UBC-like domain 2Interproscan
IPR044037DomainFANCL, UBC-like domain 3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR13206UBIQUITIN LIGASE PROTEIN PHF9 FANCONI ANEMIA GROUP L PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006513Biological Processprotein monoubiquitinationInterproscan
GO:0036297Biological Processinterstrand cross-link repairInterproscan
GO:0043240Cellular ComponentFanconi anaemia nuclear complexInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP