Gene detail

Detailed information of pred2_38497.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_38497.1	HEAT SHOCK PROTEIN 70KDA	Sc3x4tf_155	1047772	1009778	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_38497.1

ATGGTATTGAAACATCACATTACAGGTGGAGCTGGTTTTGTTGGGTCCCACTTAGTTGATCGTCTCATGCTTCAAGGTCATGAGGTCAGTGTGGTAGACAATTTCTTCACTGGAAGAAAACGAAATGTTGAACACTGGATTGGCCATGAAAATTTCGAATTGCTTCATCATGACATTGTGAATCCTTTGTATATAGAAGTTGACCAGATCTATCATTTGGCCTCTCCAGCATCACCTCCAAATTATATGTACAACCCAATTAAAACAATCAAGACTAACACAATTGGGACTATCAATGTTCTTGATCCAAAGGTTCATCCACAAGTGGAAGAATATTGGGGTCATGTCAATCCAATTGGTCCACGGGCGTGTTATGATGAAGGAAAAAGAGTGGCTGAAACCATGTGTTATGCCTATGAAAAGCAGGAAAAACTTGAGGTTCGTGTGGCACGAATATTCAACACATTTGGGCCCCGCATGCACATGAATGATGGCAGAGTTGTTAGTAATTTCATCTTACAGGCTTTACAAAATGAATCCATCACGGTATATGGTGATGGTAGTCAGACACGGTCATTCCAGTACGTCAGTGACTTAGTTGATGGACTAATGGCTTTAATGAATAGTAATTATTCAAAACCAGTCAACCTGGGAAACCCTGAAGAGCATTCCGTGATGGAATTTGCACAAATCATTAAGAATATAGTTGGTGGTGAAAGCAAAATTGAGAAACGCCCTGCAATGCAAGACGACCCTCAGAGGAGGAAGCCAGATATAACCAAAGCACGCAAATATCTCAACTGGCAACCAAAACGAAAAAGACAAATCAAAATGGCTAAAGCAGCAGCAATTGGTATTGATTTGGGCACAACCTACTCATGTGTGGGTGTGTTCGAACATGGCAAGGTAGAAATCATCGCCAATGACCAGGGCAACAGGACCACACCCAGCTATGTGGCATTTACGAACACAGAGAGGTTAATTGGAGCTGCTGCCAAACATCAGGCAGCACTCAATCCAGAAAACACGTTGTTTGATGCGAAACGATTGATTGGCAGAAAGTTCGATGAGCCATGCGTACAAAGCGACATGAAACACTGGCCATTCCGGGTGGTGAACAGTGACGGAAAACCGAAGCCTCAGGTCGACTACCTCGGAGAGAGGAAGACGTTCTCTCCGGAGGAGATCAGTTCGATGGTATTGAGCAAGATGAGGGAGACCGCAGAGTCTTACCTCGGCTACAAAGTGACAGATGCAGTTGTCACGGTTCCTGCATACTTCAACGATTCGCAGAGACAGGCAACAAAAGATGCGGCCGCCATAGCTGGTTTGAACGTGCTGAGAATTGTTAACGAACCGACGGCTGCAGCACTGGCCTATGGTCTGGATAAGAACCTTCCGGGCGAGAAAAATGTGCTGATCTTCGATTTGGGTGGAGGTACTTTTGATGTGTCCATCTTAACTATAGACCAGGGCTCGCTGTTCGAAGTCAGGTCAACGGCTGGCGATACACACTTGGGAGGCGAGGACTTTGACAATCGACTCGTTGATCATTTCTTCCGTGAATTTAAGCGTAAACACAATAAAGACTTAAGCGACAGTCCACGTGCCCTGCGTCGTTTGCGTACGGCATGCGAACGTGCCAAACGGACACTGTCGAGTAGTAGCGAAGCGAGCCTGGAAATTGATTCGCTTTACGAAGGAATTGACTTTCACGCGAAACTCACGAGGGCACGTTTCGAAGAGCTTTGCTCAGACCTATTCCGATCGACGTTGGAACCGGTTGAGAAGGCACTGCGAGATGCTAAACTCGATAAGGCCAGCATCGATGATATTGTCTTGGTCGGTGGATCGACACGCATCCCCAAGATACAGAAATTGCTGCAAGAGTTTATGAACGGAAAGAATGTCAACAAATCCATCAACCCTGATGAGGCTGTTGCCTACGGTGCTGCCGTGCAGGCAGCTGTGCTCAGCGGTGACGACTCGACCAATATTCGAGACGTGTTGCTGGTCGACGTGGCGCCATTGTCTCTCGGAATTGAGACGGCCGGGGGCGTGATGACCAACATTATCGATCGCAACTCTCGAATCCCCACCAAGGCGTCTAAAGTGTTCACCACATACTCCGATAATCAACCCGGTGTTAACATCCAGGTATTCGAGGGAGAGAGGGCCATGACCAAAGACAACCACTGTCTTGGACGCTTCGAATTGTCAGGTATCCCGCCCGCTCCAAAAGGGGTGCCCAAAATCGAAGTCAGCTTTGATCTGGACGCCAACGGAATCCTCAGCGTGTCGGCTGTTGATAAAAGCACTGGAAAATCAAATAAGATCACCATCACAAACGACAAAGGTCGCCTGAGCAAAGAAGAAATCGACCAGATGCTGGCCGACGCACAAAAATACCAACAAGCCGACCAAGAACAACGTGAACGGGTCGACATTAGAAACCAATTGGAAAATTACGTGTTTTCTGTTAAGCAGGCTCTGGCAGATGCTGGCAATGGAAAGTTATCAGCAGACGACAACAAGCTGCTCACTGATACATGTGACCAATGTCTCCAGTGGATCGACAAGAACAACCTGGCCGACAAAGAAGAGTTCCAGGACAAATTGCAAGAAATACAAAAAGTCTGTTCACCCGTCATGTCAAAGTTGCACGCTGCTTCCTCGGCAAATAACAACGCATCACAA

Transcript

pred2_38497.1

ATGGTATTGAAACATCACATTACAGGTGGAGCTGGTTTTGTTGGGTCCCACTTAGTTGATCGTCTCATGCTTCAAGGTCATGAGGTCAGTGTGGTAGACAATTTCTTCACTGGAAGAAAACGAAATGTTGAACACTGGATTGGCCATGAAAATTTCGAATTGCTTCATCATGACATTGTGAATCCTTTGTATATAGAAGTTGACCAGATCTATCATTTGGCCTCTCCAGCATCACCTCCAAATTATATGTACAACCCAATTAAAACAATCAAGACTAACACAATTGGGACTATCAATGTTCTTGATCCAAAGGTTCATCCACAAGTGGAAGAATATTGGGGTCATGTCAATCCAATTGGTCCACGGGCGTGTTATGATGAAGGAAAAAGAGTGGCTGAAACCATGTGTTATGCCTATGAAAAGCAGGAAAAACTTGAGGTTCGTGTGGCACGAATATTCAACACATTTGGGCCCCGCATGCACATGAATGATGGCAGAGTTGTTAGTAATTTCATCTTACAGGCTTTACAAAATGAATCCATCACGGTATATGGTGATGGTAGTCAGACACGGTCATTCCAGTACGTCAGTGACTTAGTTGATGGACTAATGGCTTTAATGAATAGTAATTATTCAAAACCAGTCAACCTGGGAAACCCTGAAGAGCATTCCGTGATGGAATTTGCACAAATCATTAAGAATATAGTTGGTGGTGAAAGCAAAATTGAGAAACGCCCTGCAATGCAAGACGACCCTCAGAGGAGGAAGCCAGATATAACCAAAGCACGCAAATATCTCAACTGGCAACCAAAACGAAAAAGACAAATCAAAATGGCTAAAGCAGCAGCAATTGGTattgatttggGCACAACCTACTCATGTGTGGGTGTGTTCGAACATGGCAAGGTAGAAATCATCGCCAATGACCagggcaacagGACCACACCCAGCTATGTGGCATTTACGAACACAGAGAGGTTAATTGGAGCTGCTGCCAAACATCAGGCAGCACTCAATCCAGAAAACACGTTGTTTGATGCGAaacgattgattggcagaaagttcgatgagccatgcgtacaaagcgacatgaaacactggccattccgggtggtgaacagtgacggaaaaccgaagcctcaggtcgactacctcggagagaggaagacgttctctccggaggagATCAGTTCGATGGTATTGAGCAAGATGAGGGAGACCGCAGAGTCTTACCTCGGCTACAAAGTGACAGATGCAGTTGTCACGGTTCCTGCATACttcaacgattCGCAGAGACAGGCAACAAAAGATGCGGCCGCCATAGCTGGTTTGAACGTGCTGAGAATTGTTAACGAACCGACggctgcagcacTGGCCTATGGTCTGGATAAGAACCTTCCGGGCGAGAAAAATGTGCTGATCTTCGATTTGGGTGGAGGTACTTTtgatgtgtccatcttaactatagaccagggctcgctgttcgaagtcaggtcAACGGCTGGCGATACACACTTGGGAGGCGAGGACTTTGACAATCGACTCGTTGATCATTTCTTCCGTGAATTTAAGCGTAAACACAATAAAGACTtaagcgacagtccacgtgccctgcgtcgtttgcgtacGGCATGCGAACGTGCCAAACGGACACTGTCGAGTAGTAGCGAAGCGAGCCTGGAAATTGATTCGCTTTACGAAGGAATTGACTTTCACGCGAAACTCACGAGGGCACGTTTCGAAGAGCTTTGCTCAGACCTATTCCGATCGACGTTGGAAccggttgagaaggcactgcgagatgctaaactcgataaggccagcatcgatgatattgtcttggtcggtggatCGACACGCATCCCCAAGATACAGAAATTGCTGCAAGAGTTTATGAACGGAAAGAATGTCAACAAATCCATCAACCCTGATGAGGCTGTTGCCTACGGTgctgccgtgcaggcagctgtgctcagcggtgacgactcgaccaatattcgAGACGTGTTGCTGGTCGACGTGGCGCCATTGTCTCTCGGAATTGAGACGGCCGGGGGCGTGATGACCAACATTATCgatcgcaactcTCGAATCCCCACCAAGGCGTCTAAAGTGTTCACCACATACTCCGATAATCAACCCGGTGTTAACATCCAGGTATTCGAGGGagagagggccATGACCAAAGACAACCACTGTCTTGGACGCTTCGAATTGTCAGGTATCCCGCCCGCTCCAAAAGGGGTGCCCAAAATCGAAGTCAGCTTTGATCTGGACGCCAACGGAATCCTCAgcgtgtcggctgttgataaaagcactggaaaatcaaataagatcaccatcacaaacgacaaaggtcgcctgagcaaagaagaaatcgaccagatgctggccgacgcacaaaaataccaacaagccgaccaagaacaacgtgaacgggtcgacattagaaaccaattggaaaattacgtgttttctgttaagcaggctctggcagatgctggcaatggaaagttatcagcagacgacaacaagctgctcactgatacatgtgaccaatgtctccagtggatcgacaagaacaacctggccgacaaagaagagttccaggacaaattgcaagaaatacaaaaagtctgttcacccgtcatgtcaaagttgcacgcTGCTTCCTCGGCAAATAACAACGCATCACAATAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00012	HSP70	Hsp70 protein	Family	Interproscan
PF16363	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013126	Family	Heat shock protein 70 family	Interproscan
IPR016040	Domain	NAD(P)-binding domain	Interproscan
IPR018181	Conserved_site	Heat shock protein 70, conserved site	Interproscan
IPR029047	Homologous_superfamily	Heat shock protein 70kD, peptide-binding domain superfamily	Interproscan
IPR029048	Homologous_superfamily	Heat shock protein 70kD, C-terminal domain superfamily	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR043129	Homologous_superfamily	ATPase, nucleotide binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19375	HEAT SHOCK PROTEIN 70KDA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0140662	Molecular Function	ATP-dependent protein folding chaperone	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-