Gene detail

Detailed information of pred2_38273.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_38273.1	SERINE/THREONINE-PROTEIN KINASE LMTK1	Sc3x4tf_173	6232844	6176476	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_38273.1

ATGACTCTGGGACTGTTTCTACCTTACCAGCTTGAATGTGCAGTGAGTTTTGAAGATGAACCCGAGGACCCCCGTGAATCTTATACAGAAAGCAATGGCAGCCAAGATGGGGATAACACATCCTTGGTTACTTTTGAGCCCCTCCCGGACATTTTGGCTAAGGCAATACCTTCCACCACAGCGCTGAGGCCACGCATCACTTGCATTGCAACAGATGAAGAGGATTTTACTCCTCGGATTGTCCCTATCCATCAAGCCTTTCCCCGGAAACAGTTGACTTACATCACTGAGCTGGGAATGGGATGGTTTGGTCAGGTGGTTCAAGGTGTTGCTGATAATGTACTGGTTGGTGTCCGTCAAAGTAAGGTTGTGGTACAAGTTCTGCGAGATGATGCTTCAGCTCTGGAAATGCAGAAATTTCTTCAAGAAGTTGCTGTGTACAGAGCCATTGATCATCCTAATATCTTGCGTCTCCTTGGCATGTGCACTGAAGCCATACCATTTCTAGTTCTTTTTGAGTACTTCCCATTGGGTGATTTAAAAACCTACCTGATGGAAAACGAAAAGGACATAGCTCATCATAAACAAAGAAGGATTCTTTTGAGATTTGCTGTTGATATTGCATGTGGATTGGCTTGCCTTCATCGTCATAATTATGTCCATTGTGATCTTGCCCTTAGAAATTGCCTGGTTACAAGTGATTTAAATGTAAAGATCGGAGATTTTGGACTTTCAGAGGAAAACTTCAAGGAGGATTATTATGACACTGGATGTGATCTCCTACCTGTTCGTTGGATGGCTCCTGAAACACTTACTTTGCAAAAAGGTGTTTGGCGAACAAAGCCTTTCACGGTTCAAGCTAATATTTGGTCTTATGGTGTCACAATGTGGGAAATGACACAATTGTGTCGTCAGCCTTATCATTGGCTCACTGATGAACAAGTCTTGGAGAAAGTCGTCTCAAAAAGAACAGAGTGTTTGCCACTACCCTATTATGCTGATGATAAGCTCAATGTATATGAACTCATGAAATTGTGCTGGCGAGAAGAAGGTGAAAGACCCTCCATTGAAGAACTTCACAAAGATCTGCTTGACTTGGAAATCTCTCTAAAATACTTGGAAGAACTTGAGTTTGAGAAGAAATGGGATAAATTGAGTCCTGTGAGCCCAGTTCACATTGTGGAGTTTGAGCCTGAATCAATGGAAATTGCCACGGATGCTTTGGAGATGTTCAGTGGTGAAACTGAAGGTGCAGCCTCCAATGAAGTTATAGGTGACATTCCGGTCCATATTCCAATTGATATTCCAATTGAGGAGAAAATGACCATTAAGATGCCAAGCTATAATCTGTTGACATTTAATGATAGTGATCTGGTAACGGAGATCAGCACTGAAACTGAAAATCGACTCTTGGCTGAATTAGAATCTGAGACGAATGCTGGAATGCAGTGTGTTGCTATAGTGGAATTGGACCCTAGCAAAAAACAAGCTGAAGAGGGGAAAAAAGACAAGGAAGAAAATAAAGAACATGATGATGGTGAAAGTAGTGATGCTGTTGATGGTACCATTCCAATAAAGAAAATGAAGAAAGTAAGCTCAGAGGATAACGATGTTGTTGATGGATATGATTCACCCCCATCTCGAGCGTCATCTATTGAATCTGTGAAGGCAATGCTAGAGAAAATCAATGAACTGTCACCTATTAAAAGGGTAGATGATGATGACAGTGGTGATGAAATGTCATCTGAATTATCACAGGAGATGGCTGATATTTATTATCAAAGACACTGTCGTTCAAATGGATCACGGCGTTCTAATCTGAAAGTTACCCCCTTGGCACCTATCCCTGAAAATAGTGTGCCAGTGGATAACTTCTCAGACAGTTACGACGTGATCTTTGCTCGACCAGATGAAGAACCTTCATCTTTTCAGGATTCCTATGAATGGGATGAACTTGTAGGGGGCCAGCTGGTAGGCAAAGCAATTGAAGGGACGCCATCACCCCGAAGAAGTTTGGACTTTAGTGAATGGTCTGTAGATTCTGTGACCGCCTCCCATAGCAAACCTGCCAGTCTGTGTAGCCGTTCAAGACAAAGCAGCATTTCGAGTGAGTTTTCCGACATTTTCGGACCTTCGGAGCTCAACTTTGGGCCCGATACTTCGTCCTCTGGCTCAGGCTTAAATGCTTGTTCCATTGCTACAGAAATTTTGACTAGTCGTGTGATTGGATCACTTAACAAAAAAAACCCTCCACGCCGGACATTTTACACTATTTCCTCATTAATTGATATAGATTTGGACAGTTTTGAAGAAGACTGCGATGGATTACCTCCCCCTGAGATACCACTCTCCAGACATTCAAAATATTCAACTAGCCAAGATCTTACTACAGTTGGCCAATCAGTGTGGAAGGGACGACTACAAGCCAATACTAACCAGAACACAAAAATTCCTAATAGCTCTAAATTTGACTCCAAGTATTCTAAGGTTCTCACCTATGACGAGTGCGTCTTTTCTAATGCAACCGGACGTACAGACAAACCTATATTAGTTCCAGTTCTTTTAAACAGCACTTCTACTGACTTGGCGCTAGACACAGGCGCTACACATTCACTGATCAGTAGTCATTCCTATCGAACCCTTTGGTCTCCTACACAGCATTCTAAACTACATAAGGGCTCTGATAGATTAAAAGTATACAGTGGTTCACTATTACCTATTCTTGATGAATTGCACCTGGAATTAACACTAAAAATAACTACGGAAACAAAAACTATTGTGCTAATTATGGTTGATAGACCCAGCCCTACTCTGCTAGGCAGAGATATCCTGAAAAATTTCAATCATCTTGGTACTGAAGATGCTCTCAGCAGATTGCCTCTTCCTGTAACTGCTGAAAATATTCCAATTCCTGCTGAA

Transcript

pred2_38273.1

atgacTCTGGGACTGTTTCTACCTTACCAGCTTGAATGTGCAGTGAGTTTTGAAGATGAACCCGAGGACCCCCGTGAATCTTATACAGAAAGCAATGGCAGCCAAGATGGGGATAACACATCCTTGGTTACTTTTGAGCCCCTCCCGGACATTTTGGCTAAGGCAATACCTTCCACCACAGCGCTGAGGCCACGCATCACTTGCATTGCAACAGATGAAGAGGATTTTACTCCTCGGATTGTCCCTATCCATCAAGCCTTTCCCCGGAAACAGTTGACTTACATCACTGAGCTGGGAATGGGATGGTTTGGTCAGGTGGTTCAAGGTGTTGCTGATAATGTACTGGTTGGTGTCCGTCAAAGTAAGGTTGTGGTACAAGTTCTGCGAGATGATGCTTCAGCTCTGGAAATGCAGAAATTTCTTCAAGAAGTTGCTGTGTACAGAGCCATTGATCATCCTAATATCTTGCGTCTCCTTGGCATGTGCACTGAAGCCATACCATTTCTAGTTCTTTTTGAGTACTTCCCATTGGGTGATTTAAAAACCTACCTGATGGAAAACGAAAAGGACATAGCTCATCATAAACAAAGAAGGATTCTTTTGAGATTTGCTGTTGATATTGCATGTGGATTGGCTTGCCTTCATCGTCATAATTATGTCCATTGTGATCTTGCCCTTAGAAATTGCCTGGTTACAAGTGATTTAAATGTAAAGATCGGAGATTTTGGACTTTCAGAGGAAAACTTCAAGGAGGATTATTATGACACTGGATGTGATCTCCTACCTGTTCGTTGGATGGCTCCTGAAACACTTACTTTGCAAAAAGGTGTTTGGCGAACAAAGCCTTTCACGGTTCAAGCTAATATTTGGTCTTATGGTGTCACAATGTGGGAAATGACACAATTGTGTCGTCAGCCTTATCATTGGCTCACTGATGAACAAGTCTTGGAGAAAGTCGTCTCAAAAAGAACAGAGTGTTTGCCACTACCCTATTATGCTGATGATAAGCTCAATGTATATGAACTCATGAAATTGTGCTGGCGAGAAGAAGGTGAAAGACCCTCCATTGAAGAACTTCACAAAGATCTGCTTGACTTGGAAATCTCTCTAAAATACTTGGAAGAACTTGAGTTTGAGAAGAAATGGGATAAATTGAGTCCTGTGAGCCCAGTTCACATTGTGGAGTTTGAGCCTGAATCAATGGAAATTGCCACGGATGCTTTGGAGATGTTCAGTGGTGAAACTGAAGGTGCAGCCTCCAATGAAGTTATAGGTGACATTCCGGTCCATATTCCAATTGATATTCCAATTGAGGAGAAAATGACCATTAAGATGCCAAGCTATAATCTGTTGACATTTAATGATAGTGATCTGGTAACGGAGATCAGCACTGAAACTGAAAATCGACTCTTGGCTGAATTAGAATCTGAGACGAATGCTGGAATGCAGTGTGTTGCTATAGTGGAATTGGACCCTAGCAAAAAACAAGCTGAAGAGGGGAAAAAAGACAAGGAAGAAAATAAAGAACATGATGATGGTGAAAGTAGTGATGCTGTTGATGGTACCATTCCAATAAAGAAAATGAAGAAAGTAAGCTCAGAGGATAACGATGTTGTTGATGGATATGATTCACCCCCATCTCGAGCGTCATCTATTGAATCTGTGAAGGCAATGCTAGAGAAAATCAATGAACTGTCACCTATTAAAAGGGTAGATGATGATGACAGTGGTGATGAAATGTCATCTGAATTATCACAGGAGATGGCTGATATTTATTATCAAAGACACTGTCGTTCAAATGGATCACGGCGTTCTAATCTGAAAGTTACCCCCTTGGCACCTATCCCTGAAAATAGTGTGCCAGTGGATAACTTCTCAGACAGTTACGACGTGATCTTTGCTCGACCAGATGAAGAACCTTCATCTTTTCAGGATTCCTATGAATGGGATGAACTTGTAGGGGGCCAGCTGGTAGGCAAAGCAATTGAAGGGACGCCATCACCCCGAAGAAGTTTGGACTTTAGTGAATGGTCTGTAGATTCTGTGACCGCCTCCCATAGCAAACCTGCCAGTCTGTGTAGCCGTTCAAGACAAAGCAGCATTTCGAGTGAGTTTTCCGACATTTTCGGACCTTCGGAGCTCAACTTTGGGCCCGATACTTCGTCCTCTGGCTCAGGCTTAAATGCTTGTTCCATTGCTACAGAAATTTTGACTAGTCGTGTGATTGGATCACTTAACAAAAAAAACCCTCCACGCCGGACATTTTACACTATTTCCTCATTAATTGATATAGATTTGGACAGTTTTGAAGAAGACTGCGATGGATTACCTCCCCCTGAGATACCACTCTCCAGACATTCAAAATATTCAACTAGCCAAGATCTTACTACAGTTGGCCAATCAGTGTGGAAGGGACGACTACAAGCCAATACTAACCAGAACACAAAAATTCCTAATAGCTCTAAATTTGACTCCAAGTATTCTAAGGTTCTCACCTATGACGAGTGCGTCTTTTCTAATGCAACCGGACGTACAGACAAACCTATATTAGTTccagttctttTAAACAGCACTTCTACTGACTTGGCGCTAGACACAGGCGCTACACATTCACTGATCAGTAGTCATTCCTATCGAACCCTTTGGTCTCCTACACAGCATTCTAAACTACATAAGGGCTCTGATAGATTAAAAGTATACAGTGGTTCACTAttacctattctTGATGAATTGCACCTGGAATTAACACTAAAAATAACTACGGAAACAAAAACTATTGTGCTAATTATGGTTGATAGACCCAGCCCTACTCTGCTAGGCAGAGATATCCTGAAAAATTTCAATCATCTTGGTACTGAAGATGCTCTCAGCAGATTGcctcttcctgTAACTGCTGAAAATATTCCAATTCCTGCTGAATAG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24417	SERINE/THREONINE-PROTEIN KINASE LMTK1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-