| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_38086.1 | WASH COMPLEX SUBUNIT 4 | Sc3x4tf_454 | 175356 | 286098 | + |
| CDS | |||||
| pred2_38086.1 | |||||
| Transcript |
| pred2_38086.1 |
| Protein |
| pred2_38086.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | bHLH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00010 | HLH | Helix-loop-helix DNA-binding domain | Domain | Interproscan |
| PF07527 | Hairy_orange | Hairy Orange | Domain | Interproscan |
| PF14744 | WASH-7_mid | WASH complex subunit 7 | Family | Interproscan |
| PF14745 | WASH-4_N | WASH complex subunit 4, N-terminal | Domain | Interproscan |
| PF14746 | WASH-7_C | WASH complex subunit 7, C-terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR003650 | Domain | Orange domain | Interproscan |
| IPR011598 | Domain | Myc-type, basic helix-loop-helix (bHLH) domain | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR027307 | Family | WASH complex subunit 7 | Interproscan |
| IPR028191 | Domain | WASH complex subunit 4, N-terminal | Interproscan |
| IPR028282 | Domain | WASH complex subunit 7, central domain | Interproscan |
| IPR028283 | Domain | WASH complex subunit 7, C-terminal | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR036638 | Homologous_superfamily | Helix-loop-helix DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR31409 | WASH COMPLEX SUBUNIT 4 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005768 | Cellular Component | endosome | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0007032 | Biological Process | endosome organization | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0016197 | Biological Process | endosomal transport | Interproscan |
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| GO:0071203 | Cellular Component | WASH complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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