| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_37067.1 | TONSOKU-LIKE PROTEIN | Sc3x4tf_1130 | 188174 | 138409 | - |
| CDS | |||||
| pred2_37067.1 | |||||
| Transcript |
| pred2_37067.1 |
| Protein |
| pred2_37067.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF13516 | LRR_6 | Leucine Rich repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR052311 | Family | MMS22L-TONSL complex component | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46358 | TONSOKU-LIKE PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000724 | Biological Process | double-strand break repair via homologous recombination | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0031297 | Biological Process | replication fork processing | Interproscan |
| GO:0043596 | Cellular Component | nuclear replication fork | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
