Gene detail

Detailed information of pred2_34363.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_34363.1	TYROSINE-PROTEIN KINASE	Sc3x4tf_867	134182	13781	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_34363.1

ATGTGGATTTATAACGAGTCGCAAACTGCTGGGCACGACGTTTCCCGTGGAAATAATTATAACACCAACTCATTATTTTCATCTTCTTTACTAACTCTGGCTTTTTACAACTACCCACTCGGAGGATTCCCAAACTGGGTCCATTACAATCGGGATATAACTCTAAAACATGAAAGGCTGTATCTTATCCAACCACAGACATCTTTCTTAAATCCTGTCTGGAACCAGACTGCTAATAAAAGATGGTACATGCCTGAAAGAAATTCCAAAGGTTGGCACCAGACAGTTAAGGTAAGTGTCTGTAAGCTGAATTTCTTAAACCAATCAAAGGAACTTAATAATGGTATTGCAGTTGGCAACACTGGGCTGAATGAGTGCGGTTGTGTTCGGTGGCAAAAATACAACTTTAAGATCAGGATGCAAATCGCTGAGATGCTGTGGATGCCCTGGAGCATTATCAAGAATAAGGAGAATCTTGGAGGGAATATTATTTTGCAGACCATATTCTTTCGCTTGGGGAATAAAACATTGATGACAATGGCAGAACATTATTTTGGAACAGTGGAATCTCTTCTTAAAGCAGGCTATGTTTATGTAATGTCTGGAAATGCCATAAATGAAATACAAGAAATTCTAGTACAACTATGTCCAGATGCTGTGTCGTGTCTTGTTCTAGCTTACATCTGCATATTCGTAGTCGCAGATTTTCAGGAAGATAGACACCAAATATTTGTCAACAAAAAGAAGAAAAAATGGCTAAAAATGGCTAAAGCTGGCCAAATCACCTTAAAAGAGAAAATTCAACAAGAGTTTTTGGAATGCAAAATCTGTTTTGAACCGTATGCAAAACCGAAGGCATTACCCTGCCTTCACTCATTCTGTGCTGAGTGTCTAAAGGACTTCGTGCGAAAGAGCCCCAGCAAAAATGCAGTGCGTTTTTGCTGTCCAATCTGTCGCAAAGAAATCTCGATGCCTGCTGGTGGCATCGATGATTTCCAAGATAATTTTTGGTTATTGAGCTTGTCAAATTCTTTGGAAGAGGGCGATGAAGAATGTCGCGTATCGTGCAATGGGAAGTCTTTAAGCAATGCCTGGACAAGCCAAAAATGGAACCACCAGCCCAAAAATGTCTCGACCTCATCTAAACCTTTGTACCCCCCATCATTCCAGGAACTTATACACAGGGGGTTTGAATGGTATTTTGGTAAAGTGAGTCGTAATGCTTCAGAAGAATGGCTTCTCCATCCTGGGCTACAGAAGGGAACATTCCTTATTCGACAAGGGGAAGCTCTTCCTGACACGTATACCTTGTCAGTTCGTGACTGTGACGAGCTGCGGGGTTACCTGGTGAAACATTACAAGATTCTAACCAAAAAAGCAAGTGATGGGGAAAAGGAAGTTTATTTCATCACTCCAAAGCGAACTTTCCGGTCACTCGAGGAACTTGTCAATCATTATTCAATAGTTTCAGACGGCCTTTGCTGCAAACTAACACAGATATGCAACAAACCAAGGTCTTTACTCTGGGCAATGGACAGAGGCAAACCTGATGACTTTGTGACCACTAAAGACAATTTGCAACNNNCCAAATGGAACAACCAAGTGGAGGCAGCTGTAAAGATGCAGAAGAAAGACTGTGTGACAACTTCTGCCTTTTTGGATGAAGCCCAGATCCTGAAGACGATCCAACATGTAAATATAATTAAGTTGTTGGCTGTGTGCAGTGACGAACCTGTTTATTTGGTGACCGAATACATGCCCAATGGCCGCCTTTCACAATACCTTCGAGAAGGCAAGGGTAAACAGCTTGGGGTCAACAGTCTCATCTGGCTTGCTGCTCAGATTGCAGATGGAATGGCATATATGGAAAAAGAGAATTTTGTGCATAGAAATCTGGGTGCACGGAACATCCTGGTTGCTGACCAAAACAAAGTTAAAATTGCTGGTTTTGGGATGACCAAAGTGGCTGATGACCCTGACTACAATTTCAGGAAAGGTTTGAAAATGGCTGTAAAATGGATGGCCCCTGAAGTCTTGTTATATAATAAGTATAGCACAAAGGCCGATGTGTGGTCCTTTGGAATCGTCTTAATGGAAATATTTTCATATGGCAAGGAACCCTACGATGGTATGGGAAGCAAGGAAGCCTTTGAAAATGTCCAGTCTGGTTACCGCATGCCTTGTCCCGCCTGTTGCCCTGCTGAGGTCTACAATGTGGCCCTGACCTGTTGGAACATTAATACCCAACGTCGACCGTCTTTTGACTTCCTCAACAGCTTCCTTCATGACTGGCACTACACGTCC

Transcript

pred2_34363.1

ATGTGGATTTATAACGAGTCGCAAACTGCTGGGCACGACGTTTCCCGTGGAAATAATTATAACACCAACTCATTATTTTCATCTTCTTTACTAACTCTGGCTTTTTACAACTACCCACTCGGAGGATTCCCAAACTGGGTCCATTACAATCGGGATATAACTCTAAAACATGAAAGGCTGTATCTTATCCAACCACAGACATCTTTCTTAAATCCTGTCTGGAACCAGACTGCTAATAAAAGATGGTACATGCCTGAAAGAAATTCCAAAGGTTGGCACCAGACAGTTAAGgtAAGTGTCTGTAAGCTGAATTTCTTAAACCAATCAAAGGAACTTAATAATGGTATTGCAGTTGGCAACACTGGGCTGAATGAGTGCGGTTGTGTTCGGTGGCAAAAATACAACTTTAAGATCAGGATGCAAATCGCTGAGATGCTGTGGATGCCCTGGAGCATTATCAAGAATAAGGAGAATCTTGGAGGGAATATTATTTTGCAGACCATATTCTTTCGCTTGGGGAATAAAACATTGATGACAATGGCAGAACATTATTTTGGAACAGTGGAATCTCTTCTTAAAGCAGGCTATGTTTATGTAATGTCTGGAAATGCCATAAATGAAATACAAGAAATTCTAGTACAACTATGTCCAGATGCTGTGTCGTGTCTTGTTCTAGCTTACATCTGCATATTCGTAGTCGCAGATTTTCAGGAAGATAGACACCAAATATTTGTCAACAAAAAGAAGAAAAAATGGCTAAAAATGGCTAAAGCTGGCCAAATCACCTTAAAAGAGAAAATTCAACAAGAGTTTTTGGAATGCAAAATCTGTTTTGAACCGTATGCAAAACCGAAGGCATTACCCTGCCTTCACTCATTCTGTGCTGAGTGTCTAAAGGACTTCGTGCGAAAGAGCCCCAGCAAAAATGCAGTGCGTTTTTGCTGTCCAATCTGTCGCAAAGAAATCTCGATGCCTGCTGGTGGCATCGATGATTTCCAAGATAATTTTTGGTTATTGAGCTTGTCAAATTCTTTGGAAGAGGGCGATGAAGAATGTCGCGTATCGTGCAATGGGAAGTCTTTAAGCAATGCCTGGACAAGCCAAAAATGGAACCACCAGCCCAAAAATGTCTCGACCTCATCTAAACCTTTGTACCCCCCATCATTCCAGGAACTTATACACAGGGGGTTTGAATGGTATTTTGGTAAAGTGAGTCGTAATGCTTCAGAAGAATGGCTTCTCCATCCTGGGCTACAGAAGGGAACATTCCTTATTCGACAAGGGGAAGCTCTTCCTGACACGTATACCTTGTCAGTTCGTGACTGTGACGAGCTGCGGGGTTACCTGGTGAAACATTACAAGATTCTAACCAAAAAAGCAAGTGATGGGGAAAAGGAAGTTTATTTCATCACTCCAAAGCGAACTTTCCGGTCACTCGAGGAACTTGTCAATCATTATTCAATAGTTTCAGACGGCCTTTGCTGCAAACTAACACAGATATGCAACAAACCAAGGTCTTTACTCTGGGCAATGGACAGAGGCAAACCTGATGACTTTGTGACCACTAAAGACAATTTGCAACNNNCCAAATGGAACAACCAAGTGGAGGCAGCTGTAAAGATGCAGAAGAAAGACTGTGTGACAACTTCTGCCTTTTTGGATGAAGCCCAGATCCTGAAGACGATCCAACATGTAAATATAATTAAGTTGTTGGCTGTGTGCAGTGACGAACCTGTTTATTTGGTGACCGAATACATGCCCAATGGCCGCCTTTCACAATACCTTCGAGAAGGCAAGGGTAAACAGCTTGGGGTCAACAGTCTCATCTGGCTTGCTGCTCAGATTGCAGATGGAATGGCATATATGGAAAAAGAGAATTTTGTGCATAGAAATCTGGGTGCACGGAACATCCTGGTTGCTGACCAAAACAAAGTTAAAATTGCTGGTTTTGGGATGACCAAAGTGGCTGATGACCCTGACTACAATTTCAGGAAAGGTTTGAAAATGGCTGTAAAATGGATGGCCCCTGAAGTCTTGTTATATAATAAGTATAGCACAAAGGCCGATGTGTGGTCCTTTGGAATCGTCTTAATGGAAATATTTTCATATGGCAAGGAACCCTACGATGGTATGGGAAGCAAGGAAGCCTTTGAAAATGTCCAGTCTGGTTACCGCATGCCTTGTCCCGCCTGTTGCCCTGCTGAGGTCTACAATGTGGCCCTGACCTGTTGGAACATTAATACCCAACGTCGACCGTCTTTTGACTTCCTCAACAGCTTCCTTCATGACTGGCACTACACGTCCTGA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00017	SH2	SH2 domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13445	zf-RING_UBOX	RING-type zinc-finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR000980	Domain	SH2 domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR027370	Domain	Zinc finger, RING-type, eukaryotic	Interproscan
IPR036860	Homologous_superfamily	SH2 domain superfamily	Interproscan
IPR050198	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0004715	Molecular Function	non-membrane spanning protein tyrosine kinase activity	Interproscan
GO:0005102	Molecular Function	signaling receptor binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0030154	Biological Process	cell differentiation	Interproscan
GO:0031234	Cellular Component	extrinsic component of cytoplasmic side of plasma membrane	Interproscan
GO:0045087	Biological Process	innate immune response	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-