| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_33845.1 | - | Sc3x4tf_185 | 4930439 | 4982977 | + |
| CDS | |||||
| pred2_33845.1 | |||||
| Transcript |
| pred2_33845.1 |
| Protein |
| pred2_33845.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00057 | Ldl_recept_a | Low-density lipoprotein receptor domain class A | Repeat | Interproscan |
| PF00112 | Peptidase_C1 | Papain family cysteine protease | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000169 | Active_site | Cysteine peptidase, cysteine active site | Interproscan |
| IPR000668 | Domain | Peptidase C1A, papain C-terminal | Interproscan |
| IPR002172 | Repeat | Low-density lipoprotein (LDL) receptor class A repeat | Interproscan |
| IPR023415 | Conserved_site | Low-density lipoprotein (LDL) receptor class A, conserved site | Interproscan |
| IPR036055 | Homologous_superfamily | LDL receptor-like superfamily | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0008234 | Molecular Function | cysteine-type peptidase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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