Detailed information of pred2_30107.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_30107.1SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Sc3x4tf_570589768438544-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10373EST1_DNA_bindEst1 DNA/RNA binding domainRepeatInterproscan
PF10374EST1Telomerase activating protein Est1RepeatInterproscan
PF12171zf-C2H2_jazZinc-finger double-stranded RNA-bindingFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000690DomainMatrin/U1-C, C2H2-type zinc fingerInterproscan
IPR003604DomainMatrin/U1-C-like, C2H2-type zinc fingerInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR018834DomainDNA/RNA-binding domain, Est1-typeInterproscan
IPR019458DomainTelomerase activating protein Est1-like, N-terminalInterproscan
IPR022755DomainZinc finger, double-stranded RNA bindingInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR045153FamilyEst1/Ebs1-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15696SMG-7 SUPPRESSOR WITH MORPHOLOGICAL EFFECT ON GENITALIA PROTEIN 7Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005697Cellular Componenttelomerase holoenzyme complexInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0042162Molecular Functiontelomeric DNA bindingInterproscan
GO:0070034Molecular Functiontelomerase RNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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