Detailed information of pred2_28643.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_28643.1LYSYL-TRNA SYNTHETASESc3x4tf_82118589881872898+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00152tRNA-synt_2tRNA synthetases class II (D, K and N) DomainInterproscan
PF01239PPTAProtein prenyltransferase alpha subunit repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002088RepeatProtein prenyltransferase, alpha subunitInterproscan
IPR004364DomainAminoacyl-tRNA synthetase, class II (D/K/N)Interproscan
IPR006195DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR018149DomainLysyl-tRNA synthetase, class II, C-terminalInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR42918LYSYL-TRNA SYNTHETASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004824Molecular Functionlysine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0006430Biological Processlysyl-tRNA aminoacylationInterproscan
GO:0008318Molecular Functionprotein prenyltransferase activityInterproscan
GO:0017101Cellular Componentaminoacyl-tRNA synthetase multienzyme complexInterproscan
GO:0018342Biological Processprotein prenylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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