| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_22569.1 | SMALL NUCLEAR RIBONUCLEOPROTEIN | Sc3x4tf_790 | 100746 | 103620 | + |
| CDS | |||||
| pred2_22569.1 | |||||
| Transcript |
| pred2_22569.1 |
| Protein |
| pred2_22569.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01423 | LSM | LSM domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001163 | Domain | Sm domain, eukaryotic/archaea-type | Interproscan |
| IPR010920 | Homologous_superfamily | LSM domain superfamily | Interproscan |
| IPR044641 | Family | Sm-like protein Lsm7/SmG | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10553 | SMALL NUCLEAR RIBONUCLEOPROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005688 | Cellular Component | U6 snRNP | Interproscan |
| GO:0005689 | Cellular Component | U12-type spliceosomal complex | Interproscan |
| GO:0071004 | Cellular Component | U2-type prespliceosome | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:0097526 | Cellular Component | spliceosomal tri-snRNP complex | Interproscan |
| GO:1990726 | Cellular Component | Lsm1-7-Pat1 complex | Interproscan |
| GO:1990904 | Cellular Component | ribonucleoprotein complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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