Gene detail

Detailed information of pred2_21212.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_21212.1	ZINC/IRON TRANSPORTER	Sc3x4tf_559	4257541	4216315	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_21212.1

ATGGCCGGTACAGCTAGTATGTTGTCCATCGGGGCTTATGGAGAATATTCCGATGAAGAAGAAACAGAACAACATTCTTCTGAGGCCGAAGACGACATTCATAAAGAGGACGAAAATGGGGAAAGTAAGAACAAGAGCCAGGCTTCTGTCAGCAATAAAAGCAACTCAAACAGCAATAGTAATAACAATAACACTAGTTCTTTAAGAAGTACGACTAGTCGTGATGATGACAGTGAGTCGAGATTAGGATTTGATCATTCACATTCAGCTATTGACAATATTTCCGACGATGAAAGCTTTCGAGTTGAGCAATTGCGGAGAGTATCATCTGCTCCTCCCGTGGACAGTAGTAGAGAAAAAGAAGTTAACACAAAAACAGAAGACGACAAAGACCAGAAAATTATGAAAGCCAAAACTCGACTGGTATCGTATGGAGATATTGAAGATAAGAGTGAATCGGAGAGAGAAGAAGACAGTGACGTAGATCCTGATCCCCAAAGGTTTTTAGTTATAAGTCAAGATAAAGATTCGATTCTGAAACCGGAACAAGCATCTTCTTTATCGCGGAGTGTACAGAACATGTCAGCGGAAGATATCCAGTTGCCACCAGAACCTGTCGGACGATGTTCCCGAGCATTGCAGGAAAAGATTTCTAACTACTATACGAGTTTGAAACAAGAAGGTCACAATTTAAGCCATTTAATACAGCAACGAAAAGATTTTAGGAACCCAAGTATTTATGAGAAATTGATTGAATTTTGCCAGATCAATGAAAAGGGAACCAATTATCCTCCAATTGAATTTGTCACTGGTACCAAAAAGACGCCTTCTGCTGCTGATGGACCTGTTGAGAAAAAACGAAAGACCAAGTGGGATGCACAGCCCCAGGGTCCTGCAGCGGTTGCAGCTGCTGCCGCACTTGTACGTCAACCTGGTGTTACCACAGCTATTTTAAATCCAGCTCGGGGGGCCCTCACCACCACTGCCACAGGCACAAAGAGCACATTTGTGAATTTAACGCGCCCGACACACATCAGCAAAGCAGACAAGAAAGAAATGGACGATCTCGATATTTTAAAAATTGGAATCACGGTGGGTCTCCTCTTTGGAATTCTTTTCATCTGCATCGTTTGCTATTTTATTTTGGACTGTATCGCTAAACGTTGTAACAAGGAGAGCAAAAAGAATGGGAAAAGTCGTCAAAACAAGCTTTTCTCTCGCTTGAACCTTTTCAGCGGCGGGGTCTTCTTCGCCACTTCTTTTCTTCACCTGTTGCCGGAGGCGAAAGAAGAAATAAACAAGTTTTTGGAACTATCTACCATTTCGCTTGATTTTCCTACATGCGAGTTTATAGTCAGCATCGGCTTCTTTCTGGTTCTCATAGCCGAACAGCTGACCTCAAGGCTGCAGAAGACATTTGAGGCCCGCAAAAAAGCAAAATCCTTGCAGTCTAACCAGACGCCGATTTTCACAGCTGACATTTCAATTAACATCACGACTGGGGATAACAGTGTTAAAAAGGATCAATCAGAACCCAACTACGCTGAATCCCTCCCCGTGGAAAATAAAACCGAAGGCCCCGAATCTGAGAATCGGGACAACAAAAGTACTTCGATAATACTCTGTAACGATCAGACCTGCACAGAATATGATTTATCACCGATCGAAAAGCCTGATTCTCTCGATATGGAATTCCCTAGCAAGAGAGCTCGTAGAGACGAAAGCCTCTTGGATGTCGGTTTGTATACAACAAACAGGAACGAGATCACGTCTTCCGATAAAGATGGCACCAGTATCGAACCCTTCAGCACAGTTAGTGACTCCGACCCCTCCATGCTAACATTCCATTCTCATGGGTCCTCGATGCACAAGTTTCAATCCGAAAACAGCCTCACGAATTACAACACTGTGTTTTCCACCTCGCAATTAGCTTATTGCGATTGTCGCTTAAACCATGTTAATAAATACGTGAACGCAGACACAGATGTTAATAACCAAATCACGACGACACCCGGGACAGATTCTTATCTTAAAAAAGCAATAGAACCACCCGATTCTGTCTCCACAGTCCGCCCATCGAGCCAGCGAGAGGGATACCGAGCTATTATCTTGCTGGTTTCCCTATTATTCCACTCGCTTTTTGATGGTCTCGCCCTGGGGCTTCAAACCAATCTTACCAACATCTACACCATCCTGATTGCTATACTCTTCCACAAGACTTTGGTCGCCTTCAGCCTGACCCTCAAATTCTACCGAGCGTTTCCCGGAAGAATGCGATTAATCTTTCTTTGTCTCTCCCTTTTTTCCATCATTTCACCTGTTGGATGTGTGATCGGCTCGCTGGTCTCCGGAAGTGATTCCATTCACATTGTGGTCCGTACAGGCTGTTCCGGTATCTTACAAAGCCTCGCCACAGGGACCTTTCTCTACGTTACTTTTATAGAGATTCTTGGGCCCGAACTGGGACATGGACAACTTAGGCTTATAAGTATATCGTTTGTTTTTGTCGGCTTTCTAGCCATTGCACTATTGAAATTCCTCCTG

Transcript

pred2_21212.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02535	Zip	ZIP Zinc transporter	Family	Interproscan
PF07818	HCNGP	HCNGP-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003689	Family	Zinc/iron permease	Interproscan
IPR012479	Family	SAP30-binding protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11040	ZINC/IRON TRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005385	Molecular Function	zinc ion transmembrane transporter activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0030001	Biological Process	metal ion transport	Interproscan
GO:0046873	Molecular Function	metal ion transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0071577	Biological Process	zinc ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-