| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_20417.1 | TALIN | Sc3x4tf_442 | 5250351 | 5643946 | + |
| CDS | |||||
| pred2_20417.1 | |||||
| Transcript |
| pred2_20417.1 |
| Protein |
| pred2_20417.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00373 | FERM_M | FERM central domain | Domain | Interproscan |
| PF01608 | I_LWEQ | I/LWEQ domain | Family | Interproscan |
| PF08913 | VBS | Vinculin Binding Site | Domain | Interproscan |
| PF09141 | Talin_middle | Talin, middle domain | Domain | Interproscan |
| PF16511 | FERM_f0 | N-terminal or F0 domain of Talin-head FERM | Domain | Interproscan |
| PF21692 | Talin_R4 | Talin, R4 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002558 | Domain | I/LWEQ domain | Interproscan |
| IPR011993 | Homologous_superfamily | PH-like domain superfamily | Interproscan |
| IPR015009 | Domain | Vinculin-binding site-containing domain | Interproscan |
| IPR015224 | Domain | Talin, central | Interproscan |
| IPR019747 | Conserved_site | FERM conserved site | Interproscan |
| IPR019748 | Domain | FERM central domain | Interproscan |
| IPR032425 | Domain | Talin, N-terminal F0 domain | Interproscan |
| IPR035964 | Homologous_superfamily | I/LWEQ domain superfamily | Interproscan |
| IPR036476 | Homologous_superfamily | Talin, central domain superfamily | Interproscan |
| IPR036723 | Homologous_superfamily | Alpha-catenin/vinculin-like superfamily | Interproscan |
| IPR037438 | Domain | Talin-1/2, rod-segment | Interproscan |
| IPR049108 | Domain | Talin, R4 domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19981 | TALIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001726 | Cellular Component | ruffle | Interproscan |
| GO:0003779 | Molecular Function | actin binding | Interproscan |
| GO:0005178 | Molecular Function | integrin binding | Interproscan |
| GO:0005200 | Molecular Function | structural constituent of cytoskeleton | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0005925 | Cellular Component | focal adhesion | Interproscan |
| GO:0007155 | Biological Process | cell adhesion | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| GO:0098609 | Biological Process | cell-cell adhesion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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