Gene detail

Detailed information of pred2_20126.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_20126.1	PROTON MYO-INOSITOL COTRANSPORTER	Sc3x4tf_546.1	1355452	1332927	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_20126.1

ATGGAAATTACTTCAGAAACTAACCTAGTAAACGCTGATGAAAATGTGCCAAACCCTTCGAAAAAGCCGTGGTTGGTATATATTTTGACGTTCTTTGGTCATTTGTCGTTAGTCAATCTGGGTTATGATATGGGCGCTACATCAGGGGCCGTTCTACTCGCCGAAAACCTCGATTATCTTCATCTGAATCAAGTATGGAAACAACTGATCACAGCCGGATCGATGCCAAGTGCCGCTCTCAGTGTTTTAATCGGGGCTTATTTCAGCGACAGATTCGGACGAATAAAGTGTCTAATGTTCTCTTGTTTTTGCTATATGCTTGGGTCTGTCGTCTCCGGTTCAGCTTCCAACAGAGAGAGTTTGTTCATTGGACGGTTACTGATTGGGTGTGGAATGGGATTTGCCTCTGCTGCTAATGCTGTGTATGTTGCAGAATGTTCCCCAAACCACATGCGTGGCCGTCTGGTTGGCGTTAGTCAAATATTTATGACCGTAGGAATTCTATTTGGCACAGTCATCGCTGACCTCTTCAGCCATGACAAGAAGAACGGATGGAGGGGTGTCTTCGGTTGTACCCAATTCCTTGCTTTGATTTTTCTTCCGGAATCTCCACGCTGGTTTATTCAGAAATCCCGCAAGAATGAAGCGGAGAAATCACTGGCCAGGATTAGAAACACAGAAAATATCGAAGAAGAAATTCAAGAAATCGAAGCGAATTTCAAAGAACTACAAGCATCGATTGAGAACTCAGGTGGAGGCAATTTGCTTGTGAGAATGCTTAAAACCCGTTCGGTAAGGCGGGCTCTGGTGGTGGGCTGTGGAATACAGCTATTCGCTCAGTTCTCCGGCCAAATAACTGCCCCAGACCCCACATCTAATTTATTTCTGCCTCTAACGATAAAGAAAAACCCATTAAAACATGTCTCTTGTCTTCGTTTACTATTCTTTGTATTCCCCCTTTCTTCTCTCAGATATTACAGTGGAATCATAATCCAAATGTCTGGAGTTGGAAATGTGACAAGTGATCTCTGGAACTCTGTTATTGTCAACTTTGTTAGCCTCATATTTTCCATCATCGGAGTGTGGTTGGTAGACGCCGTAGGAAGAAGGAAATTAGCAATTATTGGACTCTTTGGTCTATTCTTCAGTAGTTTGTGTTTAGGAACAACTTTTCTTATGGCAGCCAAATATTCCCCCCTGGTCAACGGCACAGACGACTTCCTTAACAGCACCTGTTTCACATACAGCCAGTGTGACGATTGTATCAGAGATGCGGCCTGTGGCTTTTGTTATGAAGATGTACGTGATGTCATGAATGGTGCCTGTCTACCAGTCAGCGACACCACTGTTATGGCATCCGAAGTAGGGGCATGTAACTCTTCATTAACTCTTTCGAAACATTCCATGAAATGGGCTTATGAGTACTGTCCTGTATCTTTCTCGTGGGTAGCGATCATTGGACTCGCTCTTTTCTTCATGTTTTACGCTCCAGGTATGGGTCCCCTTCCGTGGATAATCAATGCTGAGATTTATCCCCTGTGGGCACGCAGCACGGGCAACGGGATTGGATCCATGACAGCTAGTTCTTGTAACATGATTATCGCAACCACGTTTCTGTCTTTTGTTGAACTCATTCAGATTTACGGTGTTTTCTACGTGATGGCGTCTGTGGCTTTGATTGGGTCGGTCTTTTGTTTCTACTTTCTGCCCGAAACAAAGAACAAGTCTTTGGAAGAAATCGAAGCGTTATTTTCATCGAATAAGGCAACTGTTTTGCGACAAAACAATCTTACACAGATATGCGTACTGATCCTGACAACATTCTTTTTGTTATCTCCCTTTGTCATGAGACAGAATGATTCCTATGCTGAAGATCCTCATAATTTGCTTTTCATGAGCAACACTGAAGAATTTGATGACGTTCCCATATATTTTGAAAAAGAATTACCGAAATGGTTAAAAGGAACTTTGATAAGAAATGGAGTCGGTAGATTTGAAGTCGGTGAACGTAAAATGCTTCACTTGTTCGATGGATTTGCTAAACTCAGTAGTTGGAAATTTAATGGCCGCGGTGATGCCACTTTCTCCACAAAATTTATCAAAAGTAACTTTTATAAACAGTCCATAAAATCAAACGACATCGCACCATTCCTCAACTTTATGGGTGTTGAACCACCTTACGGATTTTGGGAACGGTTTAAAGTATTAACAAACAGTTTCGACAACATGAACGTAAACGTTTATCCATTTCACAAAGCCGACAATAATCAGTCGGGTTATTATGCCTTGACAGACTTTTGGAAAATGTACGAATTTAATGCCACCAATCTGGAAACAATTAAGCTTATTTCACCTAAAATTCCCGGGGGTGGTTTTGAATTTGCTTCTTTTGCCTCCACTGCCCACCCAGTGCAAGAGCCTGGCAAGACTTCTACTCTGGTACACCTTGGAAAAGCCAAAGTGTGGCCTTGGGAAGCGAACACTCTCAATTTGATACGTATTCACTCGACATACGACCGAGAGGTAGTTGCTTCTATTCCGGTCGAACCGCTCACGTATATGCACTCATTTTCCGTGAGCGAGAACTACGCCATTTTCTTCCTCAGTCCTATCTACGGCGATATGTCTGACTTTATAAAAACCACACAAATCGTCTCGACGTTAGTGTGGCACGGTGAAGAGACGACAAAAGTAAAAGTGATCAACCTGAAAACAGGAGAAGTGACTCATTTGGAAACAGAGCCGATCATGGTTTTTCATCATGGCAACGCTTACGAAGAAGGAAACGACACCATTCTTGTCGATCTCATTTCGTACGATGAAGGCAGTGCCGTCAAATTGTTGACCTTGGAAAACTTCCGCGACGCCGAGAAGAGGCAGACGCTGCCGTTCGATGCCAAGCTTAAAAGATACCATATTGATCTAAAAGAAAAGCGTATTATACCAAAGACATTTAACTATGAACCTGACTTCCCACAAAATTTCGATTTTCCAAGAATTAACGATGCTTACAACGGCAAGCATTACTGCTTCTTGTACGGCGCAGCTGGTAACTTGGGCAACCTCACAATTGCCACCCATGCTATTGTGAAGAAAGACGTATGCGAAAAGGGGCGAGACCTGGCTTATATAAACACAGATCAACACATGAGCGAACCGGTGTTTGTTCCAAGACCGGACAGCAAAGGAGAAGATGATGGCGTACTCCTTACGCCTGTTCTCGATGTAACAACCAGAAAGAGTTACCTGTATATATTGGATGCAAAAACTATGAATGTAACCAACAGAGCAGAGCTGCCAACTATTATTCCATACAATTTTCATGGATCTTTTTTCAGTGAAATCTAT

Transcript

pred2_20126.1

ATGGAAATTACTTCAGAAACTAACCTAGTAAACGCTGATGAAAATGTGCCAAACCCTTCGAAAAAGCCGTGGTTGGTATATATTTTGACGTTCTTTGGTCATTTGTCGTTAGTCAATCTGGGTTATGATATGGGCGCTACATCAGGGGCCGTTCTACTCGCCGAAAACCTCGATTATCTTCATCTGAATCAAGTATGGAAACAACTGATCACAGCCGGATCGATGCCAAGTGCCGCTCTCAGTGTTTTAATCGGGGCTTATTTCAGCGACAGATTCGGACGAATAAAGTGTCTAATGTTCTCTTGTTTTTGCTATATGCTTGGGTCTGTCGTCTCCGGTTCAGCTTCCAACAGAGAGAGTTTGTTCATTGGACGGTTACTGATTGGGTGTGGAATGGGATTTGCCTCTGCTGCTAATGCTGTGTATGTTGCAGAATGTTCCCCAAACCACATGCGTGGCCGTCTGGTTGGCGTTAGTCAAATATTTATGACCGTAGGAATTCTATTTGGCACAGTCATCGCTGACCTCTTCAGCCATGACAAGAAGAACGGATGGAGGGGTGTCTTCGGTTGTACCCAATTCCTTGCTTTGATTTTTCTTCCGGAATCTCCACGCTGGTTTATTCAGAAATCCCGCAAGAATGAAGCGGAGAAATCACTGGCCAGGATTAGAAACACAGAAAATATCGAAGAAGAAATTCAAGAAATCGAAGCGAATTTCAAAGAACTACAAGCATCGATTGAGAACTCAGGTGGAGGCAATTTGCTTGTGAGAATGCTTAAAACCCGTTCGGTAAGGCGGGCTCTGGTGGTGGGCTGTGGAATACAGCTATTCGCTCAGTTCTCCGGCCAAATAACTGCCCCAGACCCCACATCTAATTTATTTCTGCCTCTAACGATAAAGAAAAACCCATTAAAACATGTCTCTTGTCTTCGTTTACTATTCTTtgtattcccccTTTCTTCTCTCAGATATTACAGTGGAATCATAATCCAAATGTCTGGAGTTGGAAATGTGACAAGTGATCTCTGGAACTCTGTTATTGTCAACTTTGTTAGCCTCATATTTTCCATCATCGGAGTGTGGTTGGTAGACGCCGTAGGAAGAAGGAAATTAGCAATTATTGGACTCTTTGGTCTATTCTtcagtagtttgTGTTTAGGAACAACTTTTCTTATGGCAGCCAAATATTCCCCCCTGGTCAACGGCACAGACGACTTCCTTAACAGCACCTGTTTCACATACAGCCAGTGTGACGATTGTATCAGAGATGCGGCCTGTGGCTTTTGTTATGAAGATGTACGTGATGTCATGAATGGTGCCTGTCTACCAGTCAGCGACACCACTGTTATGGCATCCGAAGTAGGGGCAtgtaactcttcATTAACTCTTTCGAAACATTCCATGAAATGGGCTTATGAGTACTGTCCTGTATCTttctcgtgggtAGCGATCATTGGACTCGCTCTTTTCTTCATGTTTTACGCTCCAGGTATGGGTCCCCTTCCGTGGATAATCAATGCTGAGATTTATCCCCTGTGGGCACGCAGCACGGGCAACGGGATTGGATCCATGACAGCTAGTTCTTGTAACATGATTATCGCAACCACGTTTCTGTCTTTTGTTGAACTCATTCAGATTTACGGTGTTTTCTACGTGATGGCGTCTGTGGCTTTGATTGGGTCGGTCTTTTGTTTCTACTTTCTGCCCGAAACAAAGAACAAGTCTTTGGAAGAAATCGAAGCGTTATTTTCATCGAATAAGGCAACTGTTTTGCGACAAAACAATCTTACACAGATATGCGTACTGATCCTGACAACATTCTTTTTGTTATCTCCCTTTGTCATGAGACAGAATGATTCCTATGCTGAAGATCCTCATAATTTGCTTTTCATGAGCAACACTGAAGAATTTGATGACGTTCCCATATATTTTGAAAAAGAATTACCGAAATGGTTAAAAGGAACTTTGATAAGAAATGGAGTCGGTAGATTTGAAGTCGGTGAACGTAAAATGCTTCACTTGTTCGATGGATTTGCTAAACTCAGTAGTTGGAAATTTAATGGCCGCGGTGATGCCACTTTCTCCACAAAATTTATCAAAAGTAACTTTTATAAACAGTCCATAAAATCAAACGACATCGCACCATTCCTCAACTTTATGGGTGTTGAACCACCTTACGGATTTTGGGAACGGTTTAAAGTATTAACAAACAGTTTCGACAACATGAACGTAAACGTTTATCCATTTCACAAAGCCGACAATAATCAGTCGGGTTATTATGCCTTGACAGACTTTTGGAAAATGTACGAATTTAATGCCACCAATCTGGAAACAATTAAGCTTATTTCACCTAAAATTCCCGGGGGTGGTTTTGAATTTGCTTCTTTTGCCTCCACTGCCCACCCAGTGCAAGAGCCTGGCAAGACTTCTACTCTGGTACACCTTGGAAAAGCCAAAGTGTGGCCTTGGGAAGCGAACACTCTCAATTTGATACGTATTCACTCGACATACGACCGAGAGGTAGTTGCTTCTATTCCGGTCGAACCGCTCACGTATATGCACTCATTTTCCGTGAGCGAGAACTACGCCATTTTCTTCCTCAGTCCTATCTACGGCGATATGTCTGACTTTATAAAAACCACACAAATCGTCTCGACGTTAGTGTGGCACGGTGAAGAGACGACAAAAGTAAAAGTGATCAACCTGAAAACAGGAGAAGTGACTCATTTGGAAACAGAGCCGATCATGGTTTTTCATCATGGCAACGCTTACGAAGAAGGAAACGACACCATTCTTGTCGATCTCATTTCGTACGATGAAGGCAGTGCCGTCAAATTGTTGACCTTGGAAAACTTCCGCGACGCCGAGAAGAGGCAGACGCTGCCGTTCGATGCCAAGCTTAAAAGATACCATATTGATCTAAAAGAAAAGCGTATTATACCAAAGACATTTAACTATGAACCTGACTTCCCACAAAATTTCGATTTTCCAAGAATTAACGATGCTTACAACGGCAAGCATTACTGCTTCTTGTACGGCGCAGCTGGTAACTTGGGCAACCTCACAATTGCCACCCATGCTATTGTGAAGAAAGACGTATGCGAAAAGGGGCGAGACCTGGCTTATATAAACACAGATCAACACATGAGCGAACCGGTGTTTGTTCCAAGACCGGACAGCAAAGGAGAAGATGATGGCGTACTCCTTACGCCTGTTCTCGATGTAACAACCAGAAAGAGTTACCTGTATATATTGGATGCAAAAACTATGAATGTAACCAACAGAGCAGAGCTGCCAACTATTATTCCATACAATTTTCATGGATCTTTTTTCAGTGAAATCTATTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00083	Sugar_tr	Sugar (and other) transporter	Family	Interproscan
PF03055	RPE65	Retinal pigment epithelial membrane protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003663	Family	Sugar/inositol transporter	Interproscan
IPR004294	Family	Carotenoid oxygenase	Interproscan
IPR005828	Family	Major facilitator, sugar transporter-like	Interproscan
IPR005829	Conserved_site	Sugar transporter, conserved site	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR050814	Family	Myo-inositol Transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48020	PROTON MYO-INOSITOL COTRANSPORTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005366	Molecular Function	myo-inositol:proton symporter activity	Interproscan
GO:0015798	Biological Process	myo-inositol transport	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016324	Cellular Component	apical plasma membrane	Interproscan
GO:0016702	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-