Detailed information of pred2_20123.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_20123.1BETA-CAROTENE DIOXYGENASESc3x4tf_546.112437891265631+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01777Ribosomal_L27eRibosomal L27e protein familyFamilyInterproscan
PF03055RPE65Retinal pigment epithelial membrane proteinRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001141FamilyLarge ribosomal subunit protein eL27Interproscan
IPR004294FamilyCarotenoid oxygenaseInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR038655Homologous_superfamilyLarge ribosomal subunit protein eL27 superfamilyInterproscan
IPR041991DomainLarge ribosomal subunit protein eL27, KOW domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10543BETA-CAROTENE DIOXYGENASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0003834Molecular Functionbeta-carotene 15,15'-dioxygenase activityInterproscan
GO:0004744Molecular Functionobsolete retinal isomerase activityInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0010436Molecular Functioncarotenoid dioxygenase activityInterproscan
GO:0016121Biological Processcarotene catabolic processInterproscan
GO:0016702Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0042574Biological Processretinal metabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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