Detailed information of pred2_18020.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_18020.1SRCR DOMAIN-CONTAINING PROTEINSc3x4tf_201.122545072291498+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00051KringleKringle domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00059Lectin_CLectin C-type domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000001DomainKringleInterproscan
IPR001190DomainSRCR domainInterproscan
IPR001304DomainC-type lectin-likeInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR018056Conserved_siteKringle, conserved siteInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR038178Homologous_superfamilyKringle superfamilyInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP