| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_17613.1 | G PATCH AND KOW-CONTAINING | Sc3x4tf_265 | 6102362 | 6073493 | - |
| CDS | |||||
| pred2_17613.1 | |||||
| Transcript |
| pred2_17613.1 |
| Protein |
| pred2_17613.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E2|UBC|UBC |
| Ubiquitin Family | UBD|UBC-like|UBC |
| Ubiquitin Family | E2|UEV|UEV |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00179 | UQ_con | Ubiquitin-conjugating enzyme | Domain | Interproscan |
| PF12656 | G-patch_2 | G-patch domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000467 | Domain | G-patch domain | Interproscan |
| IPR000608 | Domain | Ubiquitin-conjugating enzyme E2 | Interproscan |
| IPR005824 | Domain | KOW | Interproscan |
| IPR008991 | Homologous_superfamily | Translation protein SH3-like domain superfamily | Interproscan |
| IPR014722 | Homologous_superfamily | Large ribosomal subunit protein uL2, domain 2 | Interproscan |
| IPR016135 | Homologous_superfamily | Ubiquitin-conjugating enzyme/RWD-like | Interproscan |
| IPR023313 | Active_site | Ubiquitin-conjugating enzyme, active site | Interproscan |
| IPR026822 | Domain | Spp2/MOS2, G-patch domain | Interproscan |
| IPR041993 | Domain | G-patch domain and KOW motifs-containing protein, KOW 1 | Interproscan |
| IPR041994 | Domain | G-patch domain and KOW motifs-containing protein, KOW 2 | Interproscan |
| IPR045166 | Family | Pre-mRNA-splicing factor Spp2-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15818 | G PATCH AND KOW-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0005681 | Cellular Component | spliceosomal complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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