Gene detail

Detailed information of pred2_17608.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_17608.1	CAMK FAMILY PROTEIN KINASE	Sc3x4tf_265	5965410	5880731	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_17608.1

ATGGACAAATACGTTAAACTCCGTCGGATTGGTGAAGGTTCCTTTGGTAAAGTAATTCTTGTGCGACACAAAAGGACAAATACCAGATATGTCATCAAGGAAATTAATATGTCCAGGATGGCTGCTAGTGAACGAGCAGGAGCCCGGAAAGAGGTTTCTATGTTGGCAACCCTCAACCATAAGAACATTGTGGCCTACAAGGAATCATTTGAAGGTGATTTATACAGCAAGATAAATGATCAGCGTGGAGTAGATTTCTCTGAAGAACAGAATATATTTTTAACCAAAGATGGGATGATTAAACTTGGTGATTTTGGAATAGCCAAGGTGCTCAACAGTACATGTGACATGGCAAAGACCTGTATTGGCACACCATTTTACCTTTCTCCAGAGATTTGTGAACAACAGCCATATAATCACAAAAGAGGGAGTTATCCTCCCGTTCCAGCCAAATATTCCTCTAATCTCAGAGATCTAATTTCAACTCTTCTAAAACGATCTCCAAGGGAACGACCTACAATAAATCAGATCCTGAAGCAACCATTCCTTTGGCCAAGAATTAGGAAATTTTTGACTGAAAATGAATATTCTGATGAATTCAGTCATACTGTTGTTCATGGTTTGGCCTGTCGTCCAGTATCGGCTTCTCCTCGGCCATCATCAGCAAAACCTTCTTCAGCTGCCAGTAAGAGGCCGAATGCTAAATATGACCCATCTCTCGTCTATGGACGCAAATCTGTTGAAAGACCTACAAGTGGAAAAAAGAAAAAAACAGATATTGAAAAACCAAAGCAAGAGAAAGAACAAAAGCCACAATTGCTGTTGAAGAAGAAAGCAAATGAAGGCAACGTTCCTCAGTGTGCAGGACGATACAAAAAGTACCATGATGTCCTAGATAACATGAAGAAAGTCAGAGAGTTGAGGGCCAAAGCTGCCTCTCCAAATCAAGCCTACTTATTGAACCAAGCACGACACAACCCATTAGCAATTATTGGACGTAATAGTCCCGAGAGTAGGCCAACTAGTGCCAGGCAAGTGGCTGTGTCCAGAGCCAGTGCCGCTAGAGCTGAGCACCATATGGGAGCCCTTAATCCTGAAAGGACACTCCTTGAGTTCAAGACCCCAGGTCCACATCCCAAACCCTGGACCATAACACACACATGTTTGAACAGGAAAGAAGCGGCTCGAGCAGCTGATCAAGGCAAAATCGTTTCAGACTTTCTTCAGCGTAAAGCAGAAGCCGCAAGAAACAAGGCAAAAGCTGAAGCAGAAGTTTTAGGAATGAAGCAAGAAGCCGCCCTTTTATGTATGGACCAATGTCAAAAGACAGGACCCAACAGGAAAAGGCAGAAGCCTAAGAAATCTGTTACTCAGGTTCTCAAAGAAATTGGTGTTAAAGACGATGAATCTCAGAATAAGGAAGACGTTGAAGCAAATGCAAAAGGAGATGGAGATATTAATAGGAACAAAGAAACCGTTGACAAGAAAACAGAAAATTCCCCTGCAGCATCTGTAGACGATGCTGGTCACAGTCGATCTCGCTGGAGCCAGAAGGAGAGTATTCATCTTGAAGATCTTCCGCTTCAAGATACACTTGCAGCTGGGGTGAATGAGTTAAAACCTAACCAGGTTCCTTCTAGCCAGTCCACAAAAATGGCTAAGGACAATAATTTAGAAAGCAACCTGACTGTGGATATTGATAAGAAACCAGAAGACGCAAACCAGTCCAGTGTTAACAATAACATTGGATTAAGTGTGGTAGAAGAAGAAGACCCTGAGACTTCAAATGCCCAATCACAAAGCTTCTGGGTTGCATGTGCCGAGACTAAGGCCAAAGAAAAGAAAACTAAATTAGCCTCAAAACAGGTGGACACGAATACGGATAAAGTTGGAATATGTGATGACAATGATAAAAAGACTGTGCCAGTCATCAAGATTTTAGCACATAGTCCACTGAAAGTAAAAGAAGGAACCTTTGTTGTTGGTCTGATACCAGAAAATGTTCCAAAAGATATTATCCTCAGAAACAGAGAATTCGAAGCTGAAGAAAACAACAATAACAGCAATGGCAGCAGCGAAGAAGAAAAAGAATCCTCAGATGCAAAGAGGAAACTGAATCCTGAAAATCTCTTTTTGGGTATCACTCGAAGTTGTTCAAGCACAAGTGTACTTTGCAAAGCTTGCCGACCACATTGGTGTGGATTATGTTGTCTTTGTGGTTACAATATTCACATGCGACTGACGGGTCCTCAGCTAATTAAAACACGATCGGTGCCAGACTTGAGCAGCATTTTCAAAACTGCTCTCAGTTATCCAGAATTTGAAGAGGACTTATCCATAGAAGAATTCGAAAAGATAAGTATCAAAGAAATTCTCACCCAAGGCTACTCTCCAAAAAGATTGTCTGCCATGTCAAGTGAATATGAACCAAGTCTTGAAGAG

Transcript

pred2_17608.1

ATGGACAAATACGTTAAACTCCGTCGGATTGGTGAAGGTTCCTTTGGTAAAGTAATTCTTGTGCGACACAAAAGGACAAATACCAGATATGTCATCAAGGAAATTAATATGTCCAGGATGGCTGCTAGTGAACGAGCAGGAGCCCGGAAAGAGGTTTCTATGTTGGCAACCCTCAACCATAAGAACATTGTGGCCTACAAGGAATCATTTGAAGGTGATTTATACAGCAAGATAAATGATCAGCGTGGAGTAGATTTCTCTGAAGAACAGAATATATTTTTAACCAAAGATGGGATGATTAAACTTGGTGATTTTGGAATAGCCAAGGTGCTCAACAGTACATGTGACATGGCAAAGACCTGTATTGGCACACCATTTTACCTTTCTCCAGAGATTTGTGAACAACAGCCATATAATCACAAAAGAGGGAGTTATCCTCCCGTTCCAGCCAAATATTCCTCTAATCTCAGAGATCTAATTTCAACTCTTCTAAAACGATCTCCAAGGGAACGACCTACAATAAATCAGATCCTGAAGCAACCATTCCTTTGGCCAAGAATTAGGAAATTTTTGACTGAAAATGAATATTCTGATGAATTCAGTCATACTGTTGTTCATGGTTTGGCCTGTCGTCCAGTATCGGCTTCTCCTCGGCCATCATCAGCAAAACCTTCTTCAGCTGCCAGTAAGAGGCCGAATGCTAAATATGACCCATCTCTCGTCTATGGACGCAAATCTGTTGAAAGACCTACAAGTGGAAAAAAGAAAAAAACAGATATTGAAAAACCAAAGCAAGAGAAAGAACAAAAGCCACAATTGCTGTTGAAGAAGAAAGCAAATGAAGGCAACGTTCCTCAGTGTGCAGGACGATACAAAAAGTACCATGATGTCCTAGATAACATGAAGAAAGTCAGAGAGTTGAGGGCCAAAGCTGCCTCTCCAAATCAAGCCTACTTATTGAACCAAGCACGACACAACCCATTAGCAATTATTGGACGTAATAGTCCCGAGAGTAGGCCAACTAGTGCCAGGCAAGTGGCTGTGTCCAGAGCCAGTGCCGCTAGAGCTGAGCACCATATGGGAGCCCTTAATCCTGAAAGGACACTCCTTGAGTTCAAGACCCCAGGTCCACATCCCAAACCCTGGACCATAACACACACATGTTTGAACAGGAAAGAAGCGGCTCGAGCAGCTGATCAAGGCAAAATCGTTTCAGACTTTCTTCAGCGTAAAGCAGAAGCCGCAAGAAACAAGGCAAAAGCTGAAGCAGAAGTTTTAGGAATGAAGCAAGAAGCCGCCCTTTTATGTATGGACCAATGTCAAAAGACAGGACCCAACAGGAAAAGGCAGAAGCCTAAGAAATCTGTTACTCAGGTTCTCAAAGAAATTGGTGTTAAAGACGATGAATCTCAGAATAAGGAAGACGTTGAAGCAAATGCAAAAGGAGATGGAGATATTAATAGGAACAAAGAAACCGTTGACAAGAAAACAGAAAATTCCCCTGCAGCATCTGTAGACGATGCTGGTCACAGTCGATCTCGCTGGAGCCAGAAGGAGAGTATTCATCTTGAAGATCTTCCGCTTCAAGATACACTTGCAGCTGGGGTGAATGAGTTAAAACCTAACCAGGTTCCTTCTAGCCAGTCCACAAAAATGGCTAAGGACAATAATTTAGAAAGCAACCTGACTGTGGATATTGATAAGAAACCAGAAGACGCAAACCAGTCCAGTGTTAACAATAACATTGGATTAAGTGTGGTAGAAGAAGAAGACCCTGAGACTTCAAATGCCCAATCACAAAGCTTCTGGGTTGCATGTGCCGAGACTAAGGCCAAAGAAAAGAAAACTAAATTAGCCTCAAAACAGGTGGACACGAATACGGATAAAGTTGGAATATGTGATGACAATGATAAAAAGACTGTGCCAGTCATCAAGATTTTAGCACATAGTCCACTGAAAGTAAAAGAAGGAACCTTTGTTGTTGGTCTGATACCAGAAAATGTTCCAAAAGATATTATCCTCAGAAACAGAGAATTCGAAGCTGAAGAAAACAACAATAACAGCAATGGCAGCAGCGAAGAAGAAAAAGAATCCTCAGATGCAAAGAGGAAACTGAATCCTGAAAATCTCTTTTTGGGTATCACTCGAAGTTGTTCAAGcacaagtgtactttgcaaagcttgccgaCCACATTGGTGTGGATTATGTTGTCTTTGTGGTTACAATATTCACATGCGACTGACGGGTCCTCAGCTAATTAAAACACGATCGGTGCCAGACTTGAGCAGCATTTTCAAAACTGCTCTCAGTTATCCAGAATTTGAAGAGGACTTATCCATAGAAGAATTCGAAAAGATAAGTATCAAAGAAATTCTCACCCAAGGCTACTCTCCAAAAAGATTGTCTGCCATGTCAAGTGAATATGAACCAAGTCTTGAAGAGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR051131	Family	NEK Ser/Thr protein kinase family, NIMA subfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44899	CAMK FAMILY PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-