Gene detail

Detailed information of pred2_15733.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_15733.1	OS01G0750732 PROTEIN	Sc3x4tf_237	1005347	1059187	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_15733.1

ATGTTTCTCTCGAATATACCATGGGAAATTATGAGCAAATTGTTAATCATGGATTATGATGACGGCTGGGAGAAGCTAGGTTCTGAGGTTGGTTGCACATGGGCAGAACGTCAAAAGATACTAAATGAGCGTCACCAGGGTAGGAGCCCCACCCAGGAAATTATCACCAAATGGGGTTACCAGGATGTTACCATGTGTGATTTATACAATGTCCTGCTGAAGATCGACAGACTTGCAGAAGCGGCCATTGTTGAACAATTTTTAAAATCTAATAACATACCAAACAGAGAACGACTCAATGACTTTTCCAACCAAAGAGCTGTCTATTCATCTTCAAACGAGAACGCAACATCAACATGCCAGAGCCTGCAGCAAATTAACCCAAATTGTCTACCTCGTCCAAGTGAGCGGAATCTCTTGCCACCTAAAGACCATTCTCACTTACCAACACGCACTGACCAGCCTCCTTTCCACAAGCCTTTAAATACAGACGGACATAATCAGAATGATTCGATTAATGTGAACAAAGTGACGAACCGCAAAGAAATTGACCAGCATCCAAAAGTAGACTTTGAAGGCCATAATCAGAATCATTCGATTAATGTGAACAAAGTGACAAACCACAAAGACATTGACCGCATTCCGAAAGTGGACCTTGAAGAAGGAGCAATGGCAGCAAAACCCCCACCGCAATCTAAGAATATCAGCTCCCTGATTCCTTTTCTGGAACTTGGCTGTCTCTACACGTACAAAGAAATATCGTGTGCAACCAATGGATTCTCTGAAGATAATATTCTTGGCACTGGGGCTTTTGGTAGTGTTTATTATGGAAGGTTAAAGGAGACCGATTGTGCCATCAAAAAGTTGACTAAGGATTTCTCCGAGGTGAATGATGCAATAAGCAATCTTAAAAAGAATACATTGGATGAACTGATAATACAGTTAAAGTTCAGACATCCAAATGTTGTCAACTTGTATGGGTATTCTTTGGATCCCGATGAAACTTGCTTCATTTATGAATACATGGAAAATGGTTCTTTGGAAGATTGTCTCGCATGTGTAAAAAACAACCCCCCTCTTAGTTGGTGTGAGCGTCTACAAATTGCCCAAGGAGCTGCCTGTGGTCTGCAGTACCTACACACACAAAACGTTCCTGTCATTCATGGTGATATCAAAAGTTCCAACATCCTCATTGATAAACATAAAGAAGCCAAAATAGGTGATTTTGGTCTGGCCATGTTTGCTACCAAAGGAACCGAAACAGGAATCTTAACTCATGTATCAAACAACATGAAAACCAGCTTATTTGGAACTGTTGCCTATATGCCTCCAGAATTTCCTCGATCCAATGGAAGGCAGTATCTTGCAGGCGATGTCTACAGCTTTGGTGTTGTGCTTCATGAGATTCTGACTGGCCAGAAAGCTTATGATGAAAGACGTTCATCTAAGAGATTTTTGATGGAGTATATTGATCTAATGTTGGAGTCCCCCGATGAGAACCTCAACCGCGATGGAGACATCAACCCAGATGTGTTTAATAGACTCCAAGATATTATCGACCCAAAGGCAGGAGCTTGTTTTGGGTATATCATCAAAGACTTGTATCTGCTAGCAACCAAATGTACACGCTCTAAGAAAAAAGATCGGCCACTTATGTTGTCTGTTTATGAAGACCTTAAAAGAATTAATGTGCAACTGAATGAAATGATGTCTGAGTCAAAGAGTAATTCGTTGCCTTACCAACTGCAGCAGATGTTTGATGAACGAAACCAAAGATCTTCGAGCAGCGTTCCTCAAGCGTCAGTTGAAGAAACCCCTGTATTCACAAAGGACGACAGCCGAAATCAAGTGTCTGCTGCTGATGTTGCGACAAATGAGGAAGACTACAATTATGGTTTAAATTCCAGCAACGGCTCCGATTCAATGCCGCTCTCGGAGAGTTTGCGAAAGGAACACGATGGACCTGTCTGGCAACTGGCCTGGGCACATCCAATGTTTGGTTGTCTTTTAGCTTCGTGCAGTTATGATCGGAAAGTTATCATCTGGAAAGAGACAAATGGAACATGGATAAAACTTCATGAATATTCTAATCACGATTCCTCAGTGAACTCGGTGTGTTTTGCACCTCATGAATTTGGCCTGATGTTGGCATGCGCCAGTTCGGATGGTTCCATCTCAATCATTTCTAGTACAGGTGATGGTACGTGGGATGCCAAGAAAATAACGAATGCTCATTCAAGTGGCTGTAATGCAGTCAGCTGGGCCAATGCCATTGCTCCAAGTTCCTTGGTTGAACAGAGTGGACGACAATTAGTGATCAAACGATTTGTGTCCGGTGGTTGTGATAATTTGGTAAAAATTTGGAAGGAATCTGAAGACGGTCAATGGGTGGCTGAACACAAACTGGAAGGACATAATGATTGGGTCAGGGATGTTGCCTGGGCTCCTTCCATCGGTCTGCCAAAAAGCATCATTGCCAGTTGTTCTCAGGTGACATTATGGAAGGAGTCATTAGCAGGAACCTGGATGTGTATCAGTGATGTGGCAAAAGGCCAAGGCCAATTGAGATCTGCTAGT

Transcript

pred2_15733.1

ATGTTTCTCTCGAATATACCATGGGAAATTATGAGCAAATTGTTAATCATGGATTATGATGACGGCTGGGAGAAGCTAGGTTCTGAGGTTGGTTGCACATGGGCAGAACGTCAAAAGATACTAAATGAGCGTCACCAGGGTAGGAGCCCCACCCAGGAAATTATCACCAAATGGGGTTACCAGGATGTTACCATGTGTGATTTATACAATGTCCTGCTGAAGATCGACAGACTTGCAGAAGCGGCCATTGTTGAACAATTTTTAAAATCTAATAACATACCAAACAGAGAACGACTCAATGACTTTTCCAACCAAAGAGCTGTCTATTCATCTTCAAACGAGAACGCAACATCAACATGCCAGAGCCTGCAGCAAATTAACCCAAATTGTCTACCTCGTCCAAGTGAGCGGAATCTCTTGCCACCTAAAGACCATTCTCACTTACCAACACGCACTGACCAGCCTCCTTTCCACAAGCCTTTAAATACAGACGGACATAATCAGAATGATTCGATTAATGTGAACAAAGTGACGAACCGCAAAGAAATTGACCAGCATCCAAAAGTAGACTTTGAAGGCCATAATCAGAATCATTCGATTAATGTGAACAAAGTGACAAACCACAAAGACATTGACCGCATTCCGAAAGTGGACCTTGAAGAAGGAGCAATGGCAGCAAAACCCCCACCGCAATCTAAGAATATCAGCTCCCTGATTCCTTTTCTGGAACTTGGCTGTCTCTACACGTACAAAGAAATATCGTGTGCAACCAATGGATTCTCTGAAGATAATATTCTTGGCACTGGGGCTTTTGGTAGTGTTTATTATGGAAGGTTAAAGGAGACCGATTGTGCCATCAAAAAGTTGACTAAGGATTTCTCCGAGGTGAATGATGCAATAAGCAATCTTAAAAAGAATACATTGGATGAACTGATAATACAGTTAAAGTTCAGACATCCAAATGTTGTCAACTTGTATGGGTATTCTTTGGATCCCGATGAAACTTGCTTCATTTATGAATACATGGAAAATGGTTCTTTGGAAGATTGTCTCGCATGTGTAAAAAACAACCCCCCTCTTAGTTGGTGTGAGCGTCTACAAATTGCCCAAGGAGCTGCCTGTGGTCTGCAGTACCTACACACACAAAACGTTCCTGTCATTCATGGTGATATCAAAAGTTCCAACATCctcattgataaACATAAAGAAGCCAAAATAGGTGATTTTGGTCTGGCCATGTTTGCTACCAAAGGAACCGAAACAGGAATCTTAACTCATGTATCAAACAACATGAAAACCAGCTTATTTGGAACTGTTGCCTATATGCCTCCAGAATTTCCTCGATCCAATGGAAGGCAGTATCTTGCAGGCGATGTCTACAGCTTTGGTGTTGTGCTTCATGAGATTCTGACTGGCCAGAAAGCTTATGATGAAAGACGTTCATCTAAGAGATTTTTGATGGAGTATATTGATCTAATGTTGGAGTCCCCCGATGAGAACCTCAACCGCGATGGAGACATCAACCCAGATGTGTTTAATAGACTCCAAGATATTATCGACCCAAAGGCAGGAGCTTGTTTTGGGTATATCATCAAAGACTTGTATCTGCTAGCAACCAAATGTACACGCTCTAAGAAAAAAGATCGGCCACTTATGTTGTCTGTTTATGAAGACCTTAAAAGAATTAATGTGCAACTGAATGAAATGATGTCTGAGTCAAAGAGTAATTCGTTGCCTTACCAACTGCAGCAGATGTTTGATGAACGAAACCAAAGATCTTCGAGCAGCGTTCCTCAAGCGTCAGTTGAAGAAACCCCTGTATTCACAAAGGACGACAGCCGAAATCAAGTGTCTGCTGCTGATGTTGCGACAAATGAGGAAGACTACAATTATGGTTTAAATTCCAGCAACGGCTCCGATTCAATGCCGCTCTCGGAGAGTTTGCGAAAGGAACACGATGGACCTGTCTGGCAACTGGCCTGGGCACATCCAATGTTTGGTTGTCTTTTAGCTTCGTGCAGTTATGATCGGAAAGTTATCATCTGGAAAGAGACAAATGGAACATGGATAAAACTTCATGAATATTCTAATCACGATTCCTCAGtgaactcggtgtgttttgcacctcatgaatttggcctgatgttggcatgcgccagttcggatggttccatctcaatcatttctagtacagGTGATGGTACGTGGGATGCCAAGAAAATAACGAATGCTCATTCAAGTGGCTGTAATGCAGTCAGCTGGGCCAATGCCATTGCTCCAAGTTCCTTGGTTGAACAGAGTGGACGACAATTAGTGATCAAACGATTTGTGTCCGGTGGTTGTGATAATTTGGTAAAAATTTGGAAGGAATCTGAAGACGGTCAATGGGTGGCTGAACACAAACTGGAAGGACATAATGATTGGGTCAGGGATGTTGCCTGGGCTCCTTCCATCGGTCTGCCAAAAAGCATCATTGCCAGTTGTTCTCAGGTGACATTATGGAAGGAGTCATTAGCAGGAACCTGGATGTGTATCAGTGATGTGGCAAAAGGCCAAGGCCAATTGAGATCTGCTAGTTGA

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR050885	Family	Innate Immune Response and Plant Defense Kinases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47989	OS01G0750732 PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-