Detailed information of pred2_11238.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_11238.1DNA2/NAM7 HELICASE FAMILYSc3x4tf_62817771471708429-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors Familyzf-C2H2
Transcription Factors FamilyDM

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF00751DMDM DNA binding domainFamilyInterproscan
PF13086AAA_11AAA domainDomainInterproscan
PF13087AAA_12AAA domainDomainInterproscan
PF16399Aquarius_N_1stIntron-binding protein aquarius N-terminalRepeatInterproscan
PF21143Aquarius_N_2ndIntron-binding protein aquarius, beta-barrelDomainInterproscan
PF21144Aquarius_N_3rdIntron-binding protein aquarius insert domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001275DomainDM DNA-binding domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032174DomainRNA helicase aquarius, N-terminal domainInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR036407Homologous_superfamilyDM DNA-binding domain superfamilyInterproscan
IPR041677DomainDNA2/NAM7 helicase, helicase domainInterproscan
IPR041679DomainDNA2/NAM7 helicase-like, C-terminalInterproscan
IPR045055FamilyDNA2/NAM7-like helicaseInterproscan
IPR047187DomainUpf1-like, C-terminal helicase domainInterproscan
IPR048966DomainRNA helicase aquarius, beta-barrelInterproscan
IPR048967DomainRNA helicase aquarius, insertion domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10887DNA2/NAM7 HELICASE FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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