| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_10625.1 | PROTEIN KINASE C-BINDING PROTEIN 1 | Sc3x4tf_702 | 770360 | 841769 | + |
| CDS | |||||
| pred2_10625.1 | |||||
| Transcript |
| pred2_10625.1 |
| Protein |
| pred2_10625.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00439 | Bromodomain | Bromodomain | Domain | Interproscan |
| PF00628 | PHD | PHD-finger | Domain | Interproscan |
| PF00855 | PWWP | PWWP domain | Domain | Interproscan |
| PF01753 | zf-MYND | MYND finger | Domain | Interproscan |
| PF03221 | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| PF04218 | CENP-B_N | CENP-B N-terminal DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000313 | Domain | PWWP domain | Interproscan |
| IPR001487 | Domain | Bromodomain | Interproscan |
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR002893 | Domain | Zinc finger, MYND-type | Interproscan |
| IPR006600 | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR007889 | Domain | DNA binding HTH domain, Psq-type | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR018359 | Conserved_site | Bromodomain, conserved site | Interproscan |
| IPR019786 | Conserved_site | Zinc finger, PHD-type, conserved site | Interproscan |
| IPR019787 | Domain | Zinc finger, PHD-finger | Interproscan |
| IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| IPR037967 | Domain | ZMYND8, Bromo domain | Interproscan |
| IPR044075 | Domain | PRKCBP1, PHD finger | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46453 | PROTEIN KINASE C-BINDING PROTEIN 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003714 | Molecular Function | transcription corepressor activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006355 | Biological Process | regulation of DNA-templated transcription | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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