Gene detail

Detailed information of pred2_09593.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_09593.1	PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING	Sc3x4tf_169	5447345	5408833	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_09593.1

ATGAGTCTGGTAAAAGAAGCTAAGTACTTGGTTATTGGTGGAGGAATTGCTGGGGTAACGTGTGCTGAAACGCTCGCCGCATTGTGCCCTGAAGAAACAATTGTCCTTTTGACAGCATCACCTCTTATTAAGGCCGTCACAAATTTTAATCAGATATCCAAGACATTGGAAGAGTTTGATATTGAAGAAAAACCCTACAGTGAAATAGAAATTGACTGCCCAAATGTTCAAGTGTTGCAAAAAACTATTTCTAGCTTGGATGCCGAAAAACAGGCATTTCAGAATAGATTGGGCACTGCCAGGCAGATAATGGTTGTTGGAAATGGTGGTATTGCTACGGAACTTGTCTATGAACTTGAAAATTGTTCTGTGATTTGGGCGATTAAAGATGAAACCATCAACAGTGCATTTGTTGATGCCGGTGCTGGGAAATTCTTTTTAAGGAAACTTCATGAAAGGAAAGAAAAAAAGAAACCCTTGAAGAGAATGAAATACACTGTGGCCGAAACGCCTCGTGCTAAAACAGATGGGATTGGTGGAGCTCTTGGGCCTGATTGGTCTTCAAATGTGTCCATGTCCAGCAACCAAAAAGTTGCTAAAAAAGTCCATGTGGAATACAAGGTGGAAGTTGAGAGAATTTTGACAGATGAGGAACTAAAAGCAGATTGTCTGCAGCCATCAGTGTCTCCTCTGGAAGAAGAAGAATCTAACAGTGAATATAATTGGCCTATATATGTTCGATTAACAAATGGAAAAATCTATGGCTGTGATTTTCTAGTTAGTGCCACTGGTGTTGTGCCCAACACTGATGTTGTATTACATGGAAATTCTTTTGATCTTGCTCAAGATGGTGGAATCAAAGTAAATTCTAAAATGCAGACCAATATTCCAAATGTGTTTTCTGCTGGAGATGTTTGCACTGCATCATGGGAGATTGCTGAACAATGGTTTCAGATGCGACTTTGGACTCAAGCCCGGCAAATGGGCGCTTATGCAGCAAAGTGTATGGTTGTTGAGGAAGATATGGAAATATCTATGGACTTCTGCTTTGAATTGTTTGCCCATGTCACCAGATTCTTCAATTATAAAGTTGTTCTTATTGGAAAATACAATGCACAAGGACTTGGTGATGATTATGAATTGCTGCTAAGAGTAGAAGACGATGAATTTGTGAAAGTTGTACTGAGTAATAACAGATTACAAGGAGCCATTCTTATTGGAGAGACGGACTTGGAGGAGACATTCGAGAATTTAATACTCAACCAAATGGACTTATCATGTTTCAAAGAACATTTATTGGAGCCTGTTCTTTGTGTCACAACAACAATTCTATTACATTGTGTTGAATCAAAAAAGATTCTACTTGCAAATCTTAATACATTGACTTTGAGACATGGAGAAATGACTACAAGCCGAAGAAGTTCGCCTGTTCCCCAATTAAAATGTATGGGAGGCAGTGCGGGCTGTTATGCCTTCATCCCACAACATGTACAATGTTACAATCGAGGTTCTGATGGATATGATGTTCAATGGGAATGCAAGACTGACATGGATAATCAGTATCGTTTTGGTAAAATTGATGTCTCTTGCGAAGGCCATGATTATGCTGACGACCCTTATGTACTGGCCGGATCTTGTGGACTAGAATATACAATTGATTCTGTATCTAACACCAAAGGAGGTTCTTCCGGATATAACCCTTACTCAAACTCCAAATCTTATTATGACGATAATCAAACTGGTTTTGGTTCTGTTTTCGGATTTATTTGCGTCATAATGATAATATTCTTTGTGTACCGCACCTTTTTTGCTGGTGATAACACCAGTTACCCTAACACACCTAGTGCCCCTCCGCCTCCCTACAGCGAGACGGCTGATGGAAACTATGGTCACCCCCAGGGTCCTCCACCTCCTTACGGATTTCGTCCTGAGTACCAACAACAAAAACAATACCCAACAGGTGGACAACAGCAACAAAATAGTGCTAATAATGGCCAACCTGGCTTCTTTTCTGGTATGCTTGCAGGTGGATTGTTGGGCTACTTATTTGGCAACAACAGATCTGATTACAACAGTCCTTACTACGGTCATGACTATCAAAGACAAAGAAACTGGTTTGGCTCTCCTATTAATTCTGGTTTTGGAGGAGGGGGTGGAGCCTCATCATTTGGTGGTATGGGGTCAAGTTCAGGTTCGCGAACCTCTTCCGGGTTTGGTGGCACGAAACGTCGT

Transcript

pred2_09593.1

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06682	SARAF	SOCE-associated regulatory factor of calcium homoeostasis	Family	Interproscan
PF07992	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009567	Family	Store-operated calcium entry-associated regulatory factor	Interproscan
IPR016156	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR023753	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR050260	Family	FAD-dependent Oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43429	PYRIDINE NUCLEOTIDE-DISULFIDE OXIDOREDUCTASE DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005789	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:2001256	Biological Process	regulation of store-operated calcium entry	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-