Detailed information of pred2_08855.1 in Architeuthis dux Gene info
Gene IDAnnotationScaffoldStartEndStrand
pred2_08855.1WD-REPEAT PROTEIN 18Sc3x4tf_2722726262291741+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000634Binding_siteSerine/threonine dehydratase, pyridoxal-phosphate-binding siteInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001926DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036052Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR045227FamilyWD repeat-containing protein WDR18/Ipi3/RID3Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR18763WD-REPEAT PROTEIN 18Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005656Cellular Componentnuclear pre-replicative complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0006520Biological Processamino acid metabolic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0097344Cellular Componentobsolete Rix1 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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