| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_08607.1 | TNF RECEPTOR ASSOCIATED FACTOR | Sc3x4tf_321 | 2462662 | 2364591 | - |
| CDS | |||||
| pred2_08607.1 | |||||
| Transcript |
| pred2_08607.1 |
| Protein |
| pred2_08607.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Ubiquitin Family | E3|E3 activity RING|U-box |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08941 | USP8_interact | USP8 interacting | Domain | Interproscan |
| PF13923 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR003613 | Domain | U-box domain | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR015036 | Domain | E3 ubiquitin-protein ligase NRDP1 | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR037255 | Homologous_superfamily | NRDP1, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10131 | TNF RECEPTOR ASSOCIATED FACTOR | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0061630 | Molecular Function | ubiquitin protein ligase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
