Gene detail

Detailed information of pred2_05697.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_05697.1	CATION-TRANSPORTING ATPASE-RELATED	Sc3x4tf_344	2122363	2002725	-

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_05697.1

ATGATAACTGGCCAAGCACTCGGTGCAGGTAGTATCTATGGGAGTGAGGCCTCCCTTGAAGGAGTGCTGGTCAACAAGATTGTATTGAATAAGAATACAGAAGATCAACTGGAATGCATTGGCTACAAAGACAATACATGCAAGAAGGTCCTATTTTATATTTTAGTGTTTATCACCTTTGGTCTAGTTCTGCTGCTGTTTCATTGGCGACCCAAGTATGAAATATATTTAAAGAAGTCTCAGTGCCCGCTGGTCGAGGCAGATTGTGTTTTACTCAAGGATTCGTTCAACCATGGATTTGTGGAGAACATAAAAATCCTCTACTTGGAGAAAGGATGTTCTGTAGACTTGTATCATGGTGAGCCTATTTATCCAGAAAACACCCAGGAAACTGACGAAGTTGCTTCTTTAGTAACACCCCAGGAATGGTTGCTTAAGTATTTTGATCACCAGCATGTCAGGTACATCTGGGATTCCAAGGTCTGTTCTTTCAAGAAATTGGATGCTGATTATTTCAAAAGGCTATTGGAATTTCAATATAAACAGAGTACAGCTTTTGTAAGTAAAGTCAGTGTCAATGAAAAGGCTCAAGAAGCAATCGATGTATTGATGACATGTCACACTGACGCTTTGTGTGATAAACTGAAAAATAAAAGTTTTTCTATCCAAGTTGTTGAGTCAACAGATCTTATCAATAAATGTCACGTTGTAGCTTTTAACTGTGTTAGCATCTGTACTGATGGTGTCCCATCAATGGTTGGCTCTATAAGAGGTTTTGTTTCTCTTCTAAAACAAGTAAATGCTGATATTGTCTCAACACATTGCTTTTTTCACAGAGAGGGGCTGATTTCAAAATCTCTTGGAGAAAAAACGTTTTTGATGATGCTACAAAAATGGTCAACTTTATTAATCAAAGATCAGTTCACTCCAGAATCAAAAGGAAATCTTGAAATGTTTCAACTACTGCTGGGGCTTAAGAGTGAAGCAGGCTATCAGCAAATTCCAAGTCTTATTGAAACCCACCAGGAAGAACTGCTGATCAAAATTGAATATTATTTTCCCTCCCTTTCAACAGAAGTGTATGATTGGGTGAGGGATCCATACTCTAAATTTTCAGCTCATCCCAAGAACCTGACTTTAAGAGAAGAGGAAGAACTTTGTGAGCTGCAGTCTGATTGTACACTCAAGATGAGATTTACTGACACATCCATGGACAAGAAAGCAATAAATATATTGGTGCAGTTTTCAACTTCTTACATGTGTGAGCAAGCTTTTTCTTATTTAACAAGTCTCAAGAGGAAATACAGAAACCGTCTCCTTTCAGTTGAAGATGAAATCCACTTGTCTACAAACATCCTCTGCCGATCACTTTTGGAAGATTTCCATGGAATGAGTTGGGAACTTCAAAAACAAAAGCATCGCATCTATGGTCCAAACAACATCGTAATAGAAGTCAAATCTTATTGGAAGTTACTCATATATGAGGTGCTAAATCCCTTTTATATTTTCCAAATTGCCAGTATTATTTTATGGGCAAGTGACAATTATTATTATTACGCTGGTTGCATCTTTGTGATTTCCTGCATTTCAATTGCCATATCCCTGTATGAAACCCACAAGCAAAGCGTCACATTACATGATATGGTTGCCAGTGGAAACGAGAAGATAACTGTTAGACGAAGTGAAGATAGATATGAAGAAGTTTCAACAGAGATGTTGGTTCCAGGTGATGTGATTACGATACCTTCAAATGGCTGTATATTACAATGTGATGCTGTCTTAATAGCTGGCACGTGTATTGTTAATGAGAGTATGTTGACAGGTGAAAGCGTCCCGGTGACTAAGACACAATTGAGTGGACATGATGATGAAATTTATTCTCCTGTTGTACACAAAAAGTACACCCTATTTGCTGGTACACATGTGGTTCAGACCAGATATTATGGTCAAGCCAAAGTGTTGGCTGTGTTCCCCGTTGGCACGATTTTCCTGCGAGCTCTTGATATCATCACAATTGTTGTACCTCCTGCATTACCAGCGGCCATGACAGTTGGGACAGTCTATGCCCAGAACAGATTGAAGAAAGAAGGCATATTCTGCATCAGTCCCCCAAGGATCAACTTCTGTGGAAAGCTAAACCTCATCTGTTTTGATAAGATTATGGAAGAGCCAGGCAAAGACACAACGCGTTTTGATAGCCTCATTCCTACAGTAGTACGACCGCGGGGCGTACCATCTACTACTTCTACTGTTCCCTCTGGCGAGGACAATCTGGGTTTTTCTGCTACTACTGACTTGCTGTGGGAGCTCGGTGATAGTGACTCTGTGGTGATTCAAGAACCCGGTCAAGACACACATAAGTTCGACAATTTCATGCCCACTGTTGTAAACCCGTGCACCAAAGATACTTTTACAAACATGGACCAGACACCCTTTGAGGTTGGCATTGTCCGCCAGTTCACCTTCTCCTCTACGCTTCAACGAATGAGTGTCATCGCCCGTACCCTTGGAAAACCCCACATGGATGTTTACAGCAAAGGAGCACCTGAAAAAATAGCCTCTTTGTGTTCTCCAGAAACCATTCCTCCAGATTTTGCTGATGTCTTGCACAAATACACCATCCAAGGTTTCCGAGTTCTTGCTTTGGCCTGGAAAGAATGTGACCCTAAACTGACATGGCATCAGGCACAAAGAATAAACAGAGACAAAGTGGAATGTGATCTGAAGTTTTTGGGACTTCTGATAATGAAGAATACATTAAAGCCTCAGTCTGCTCCAATTATTAAAATGCTGCAGGCAGCAAATATTCGTTCTGTAATGGTGACTGGTGACATGATCCTAACTGCCATCAGTGTTGCCAGAAACTGTGGAATGGTGAAACCACGTGAAAAAGTAATTATTGTCAATGCCAATCCACCCGAAAATGGAAATCCAGCTCGTATTGAATGGGAACAATCAGAATCTGTTTTAGATGACTCCCCCTCTGATTCTGACCAAGAGGGCTACCATTCCATCAGAGTTGATCCAGATTATTATAAAGACCAATTTGCTGTCTCGGGAAAATCATTCTCAGTGCTAAGAAATCATTTTCCAAAACTCATTGACCAAATTTGTCAACGTGGGACCATATTTGCTCGTATGTCTCCTGAACAAAAAGCTCAGCTTGTTGAAAAGTTCCAGGAATTGGAGTATGGAACTGGATTTTGTGGCGATGGGGCAAATGACTGTGAGGCCTTAAAAGCTGCTCATGCAGGAATTTCCTTGTCCGAAACGGAAGCCTCAGTTGCTGCCCCTTTCACCTCTAGGATGCAAAACATTGAATGTGTTGTCACCGTCATCAGGGAAGGCCGTGCTGCTTTAGTAACTTCTTTTGGTTGTTTTAAGTACATGGCCCTCTACAGCCTTATCCAATTCTGCTCAGTCCTCATCTTGTACACTTTTGGAGTAAATTTGGCAGATTTTCAATATTTGTATGTTGATCTGATTATTACTACTTCTGTGGCAGTTCTAATGGGTTACACAAAAGCTCATGATAAGCTGACAGTGAAGAAGCCCCCTGGCAGCCTGGTCAAATTCAACAATATAACCTCCATTATTGTACAGGTGACACTTGTAATTATTTTCCAAACAGCAAGCTTTCTTTATTTGCAAGTCCAACCTTGGTATCATATAATTGATCCAACTAAACAGAAGAGTGACGAAGACAATATTGTTCAGTGCCATGAGACAACTCTCATTTTCCTTGTTTCTTCTTATCAATACATAACTGTTGCCTTCGCCTTCTCAAAGGGGCCTCCACACAGAAAACGCTTTTATACAAATACGTCATTTTTTAAAATTTCAGTTCCATTCACAACCGTCACTATTCTGCTGGTGGGATTCACATCACTGCTTTTAATTCATCCATTTCAAGTATTAACAAACTTCTTTCAGTTTTTAATTGTGGACTTGAATATCATATCAAATTTGAGGAAGTTCCTTTTTAAACCAGCCCTGAAAAAGAAGTACAAAATCATTGAAAAAGAACTGCAAGGCCTGATCGACTGGCCCCCAATCGGCAGTACCATATATGCTTCAGATAATTGCCAAAGCAGTGAAAACAGTACCCCTATGACCACAGAACCGAGCACATTGTACCCTCAGCCGAGA

Transcript

pred2_05697.1

ATGATAACTGGCCAAGCACTCGGTGCAGGTAGTATCTATGGGAGTGAGGCCTCCCTTGAAGGAGTGCTGGTCAACAAGATTGTATTGAATAAGAATACAGAAGATCAACTGGAATGCATTGGCTACAAAGACAATACATGCAAGAAGGTCCTATTTTATATTTTAGTGTTTATCACCTTTGGTCTAGTTCTGCTGCTGTTTCATTGGCGACCCAAGTATGAAATATATTTAAAGAAGTCTCAGTGCCCGCTGGTCGAGGCAGATTGTGTTTTACTCAAGGATTCGTTCAACCATGGATTTGTGGAGAACATAAAAATCCTCTACTTGGAGAAAGGATGTTCTGTAGACTTGTATCATGGTGAGCCTATTTATCCAGAAAACACCCAGGAAACTGACGAAGTTGCTTCTTTAGTAACACCCCAGGAATGGTTGCTTAAGTATTTTGATCACCAGCATGTCAGGTACATCTGGGATTCCAAGGTCTGTTCTTTCAAGAAATTGGATGCTGATTATTTCAAAAGGCTATTGGAATTTCAATATAAACAGAGTACAGCTTTTGTAAGTAAAGTCAGTGTCAATGAAAAGGCTCAAGAAGCAATCGATGTATTGATGACATGTCACACTGACGCTTTGTGTGATAAACTGAAAAATAAAAGTTTTTCTATCCAAGTTGTTGAGTCAACAGATCTTATCAATAAATGTCACGTTGTAGCTTTTAACTGTGTTAGCATCTGTACTGATGGTGTCCCATcaatggttggcTCTATAAGAGGTTTTGTTTCTCTTCTAAAACAAGTAAATGCTGATATTGTCTCAACACATTGCTTTTTTCACAGAGAGGGGCTGATTTCAAAATCTCTTGGAGAAAAAACGTTTTTGATGAtgctacaaaaATGGTCAACTTTATTAATCAAAGATCAGTTCACTCCAGAATCAAAAGGAAATCTTGAAATGtttcaactacTGCTGGGGCTTAAGAGTGAAGCAGGCTATCAGCAAATTCCAAGTCTTATTGAAACCCACCAGGAAGAACTGCTGATCAAAAttgaatattattttccctccctttCAACAGAAGTGTATGATTGGGTGAGGGATCCATACTCTAAATTTTCAGCTCATCCCAAGAACCTGACTTTAAGAGAAGAGGAAGAACTTTGTGagctgcagtcTGATTGTACACTCAAGATGAGATTTACTGACACATCCATGGACAAGAAAGCAATAAATATATTGGTGCAGTTTTCAACTTCTTACAtgtgtgagcaaGCTTTTTCTTATTTAACAAGTCTCAAGAGGAAATACAGAAACCGTCTCCTTTCAGttgaagatgaaATCCACTTGTCTACAAACATCCTCTGCCGATCACTTTTGGAAGATTTCCATGGAATGAGTTGGGAACTTCAAAAACAAAAGCATCGCATCTATGGTCCAAACAACATCGTAATAGAAGTCAAATCTTATTGGAAGTTACTCATATATGAGGTGCTAAATCCCTTTTATATTTTCCAAATTGCCAGTATTATTTTATGGGCAAGTGACAATTATTATTATTACGCTGGTTGCATCTTTGTGATTTCCTGCATTTCAATTGCCATATCCCTGTATGAAACCCACAAGCAAAGCGTCACATTACATGATATGGTTGCCAGTGGAAACGAGAAGATAACTGTTAGACGAAGTGAAGATAGATATGAAGAAGTTTCAACAGAGATGTTGGTTCCAGGTGATGTGATTACGATACCTTCAAATGGCTGTATATTACAATGTGATGCTGTCTTAATAGCTGGCACGTGTATTGTTAATGAGAGTATGTTGACAGGTGAAAGCGTCCCGGTGACTAAGACACAATTGAGTGGACATGATGATGAAATTTATTCTCCTGTTGTACACAAAAAGTACACCCTATTTGCTGGTACACATGTGGTTCAGACCAGATATTATGGTCAAGCCAAAGTGTTGGCTGTGTTCCCCGTTGGCACGATTTTCCTGCGAGCTCTTGATATCATCACAATTGTTGTACCTCCTGCATTACCAGCGGCCATGACAGTTGGGACAGTCTATGCCCAGAACAGATTGAAGAAAGAAGGCATATTCTGCATCAGTCCCCCAAGGATCAACTTCTGTGGAAAGCTAAACCTCATCTGTTTTGATAAGATTATGGAAGAGCCAGGCAAAGACACAACGCGTTTTGATAGCCTCATTCCTACAGTAGTACGACCGCGGGGCGTACCATCTACTACTTCTACTGTTCCCTCTGGCGAGGACAATCTGGGTTTTTCTGCTACTACTGACTTGCTGTGGGAGCTCGGTGATAGTGACTCTGTGGTGATTCAAGAACCCGGTCAAGACACACATAAGTTCGACAATTTCATGCCCACTGTTGTAAACCCGTGCACCAAAGATACTTTTACAAACATGGACCAGACACCCTTTGAGGTTGGCATTGTCCGCCAGTTCACCTTCTCCTCTACGCTTCAACGAATGAGTGTCATCGCCCGTACCCTTGGAAAACCCCACATGGATGTTTACAGCAAAGGAGCACCTGAAAAAATAGCCTCTTTGTGTTCTCCAGAAACCATTCCTCCAGATTTTGCTGATGTCTTGCACAAATACACCATCCAAGGTTTCCGAGTTCTTGCTTTGGCCTGGAAAGAATGTGACCCTAAACTGACATGGCATCAGGCACAAAGAATAAACAGAGACAAAGTGGAATGTGATCTGAAGTTTTTGGGACTTCTGATAATGAAGAATACATTAAAGCCTCAGTCTGCTCCAATTATTAAAATGCTGCAGGCAGCAAATATTCGTTCTGTAATGGTGACTGGTGACATGATCCTAACTGCCATCAGTGTTGCCAGAAACTGTGGAATGGTGAAACCACGTGAAAAAGTAATTATTGTCAATGCCAATCCACCCGAAAATGGAAATCCAGCTCGTATTGAATGGGAACAATCAGAATCTGTTTTAGATGACTCCCCCTCTGATTCTGACCAAGAGGGCTACCATTCCATCAGAGTTGATCCAGATTATTATAAAGACCAATTTGCTGTCTCGGGAAAATCATTCTCAGTGCTAAGAAATCATTTTCCAAAACTCATTGACCAAATTTGTCAACGTGGGACCATATTTGCTCGTATGTCTCCTGAACAAAAAGCTCAGCTTGTTGAAAAGTTCCAGGAATTGGAGTATGGAACTGGATTTTGTGGCGATGGGGCAAATGACTGTGAGGCCTTAAAAGCTGCTCATGCAGGAATTTCCTTGTCCGAAACGGAAGCCTCAGTTGCTGCCCCTTTCACCTCTAGGATGCAAAACATTGAATGTGTTGTCACCGTCATCAGGGAAGGCCGTGCTGCTTTAGTAACTTCTTTTGGTTGTTTTAAGTACATGGCCCTCTACAGCCTTATCCAATTCTGCTCAGTCCTCATCTTGTACACTTTTGGAGTAAATTTGGCAGATTTTCAATATTTGTATGTTGATCTGATTATTACTACTTCTGTGGCAGTTCTAATGGGTTACACAAAAGCTCATGATAAGCTGACAGTGAAGAAGCCCCCTGGCAGCCTGGTCAAATTCAACAATATAACCTCCATTATTGTACAGGTGACACTTGTAATTATTTTCCAAACAGCAAGCTTTCTTTATTTGCAAGTCCAACCTTGGTATCATATAATTGATCCAACTAAACAGAAGAGTGACGAAGACAATATTGTTCAGTGCCATGAGACAACTCTCATTTTCCTTGTTTCTTCTTATCAATACATAACTGTTGCCTTCGCCTTCTCAAAGGGGCCTCCACACAGAAAACGCTTTTATACAAATACGTCATTTTTTAAAATTTCAGTTCCATTCACAACCGTCACTATTCTGCTGGTGGGATTCACATCACTGCTTTTAATTCATCCATTTCAAGTATTAACAAACTTCTTTCAGTTTTTAATTGTGGACTTGAATATCATATCAAATTTGAGGAAGTTCCTTTTTAAACCAGCCCTGAAAAAGAAGTACAAAATCATTGAAAAAGAACTGCAAGGCCTGATCGACTGGCCCCCAATCGGCAGTACCATATATGCTTCAGATAATTGCCAAAGCAGTGAAAACAGTACCCCTATGACCACAGAACCGAGCACATTGTACCCTCAGCCGAGATGA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00122	E1-E2_ATPase	E1-E2 ATPase	Family	Interproscan
PF12409	P5-ATPase	P5-type ATPase cation transporter	Family	Interproscan
PF13246	Cation_ATPase	Cation transport ATPase (P-type)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001757	Family	P-type ATPase	Interproscan
IPR006544	Family	P-type ATPase, subfamily V	Interproscan
IPR008250	Homologous_superfamily	P-type ATPase, A domain superfamily	Interproscan
IPR023214	Homologous_superfamily	HAD superfamily	Interproscan
IPR023298	Homologous_superfamily	P-type ATPase, transmembrane domain superfamily	Interproscan
IPR023299	Homologous_superfamily	P-type ATPase, cytoplasmic domain N	Interproscan
IPR036412	Homologous_superfamily	HAD-like superfamily	Interproscan
IPR047819	Domain	P5B-type ATPase, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45630	CATION-TRANSPORTING ATPASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0019829	Molecular Function	ATPase-coupled monoatomic cation transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140358	Molecular Function	P-type transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-