| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_04550.1 | HOMEOBOX PROTEIN EMX-RELATED | Sc3x4tf_301 | 219506 | 220238 | + |
| CDS | |||||
| pred2_04550.1 | |||||
| Transcript |
| pred2_04550.1 |
| Protein |
| pred2_04550.1 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | Homeobox |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00046 | Homeodomain | Homeodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000047 | Conserved_site | Helix-turn-helix motif | Interproscan |
| IPR001356 | Domain | Homeobox domain | Interproscan |
| IPR009057 | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR050877 | Family | EMX/VAX/Noto Homeobox Transcription Factors | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24339 | HOMEOBOX PROTEIN EMX-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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