| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_01357.1 | INTEGRIN BETA SUBUNIT | Sc3x4tf_64 | 4841792 | 4757483 | - |
| CDS | |||||
| pred2_01357.1 | |||||
| Transcript |
| pred2_01357.1 |
| Protein |
| pred2_01357.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00362 | Integrin_beta | Integrin beta chain VWA domain | Domain | Interproscan |
| PF03083 | MtN3_slv | Sugar efflux transporter for intercellular exchange | Repeat | Interproscan |
| PF07965 | Integrin_B_tail | Integrin beta tail domain | Domain | Interproscan |
| PF08725 | Integrin_b_cyt | Integrin beta cytoplasmic domain | Domain | Interproscan |
| PF17205 | PSI_integrin | Integrin plexin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002369 | Domain | Integrin beta subunit, VWA domain | Interproscan |
| IPR004316 | Repeat | Sugar transporter SWEET repeat | Interproscan |
| IPR012896 | Domain | Integrin beta subunit, tail | Interproscan |
| IPR014836 | Domain | Integrin beta subunit, cytoplasmic domain | Interproscan |
| IPR015439 | Homologous_superfamily | Integrin beta-2 superfamily | Interproscan |
| IPR015812 | Family | Integrin beta subunit | Interproscan |
| IPR016201 | Domain | PSI domain | Interproscan |
| IPR032695 | Homologous_superfamily | Integrin domain superfamily | Interproscan |
| IPR033760 | Domain | Integrin beta N-terminal | Interproscan |
| IPR036349 | Homologous_superfamily | Integrin beta tail domain superfamily | Interproscan |
| IPR036465 | Homologous_superfamily | von Willebrand factor A-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10082 | INTEGRIN BETA SUBUNIT | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005178 | Molecular Function | integrin binding | Interproscan |
| GO:0005925 | Cellular Component | focal adhesion | Interproscan |
| GO:0007160 | Biological Process | cell-matrix adhesion | Interproscan |
| GO:0007229 | Biological Process | integrin-mediated signaling pathway | Interproscan |
| GO:0008305 | Cellular Component | integrin complex | Interproscan |
| GO:0009986 | Cellular Component | cell surface | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0016477 | Biological Process | cell migration | Interproscan |
| GO:0033627 | Biological Process | cell adhesion mediated by integrin | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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