| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_01222.1 | INACTIVE RHOMBOID PROTEIN | Sc3x4tf_443 | 2914067 | 2853212 | - |
| CDS | |||||
| pred2_01222.1 | |||||
| Transcript |
| pred2_01222.1 |
| Protein |
| pred2_01222.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01694 | Rhomboid | Rhomboid family | Family | Interproscan |
| PF04180 | LTV | Low temperature viability protein | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007307 | Family | Low temperature viability protein Ltv1 | Interproscan |
| IPR022764 | Domain | Peptidase S54, rhomboid domain | Interproscan |
| IPR035952 | Homologous_superfamily | Rhomboid-like superfamily | Interproscan |
| IPR051512 | Family | Inactive Rhomboid | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45965 | INACTIVE RHOMBOID PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0005789 | Cellular Component | endoplasmic reticulum membrane | Interproscan |
| GO:0016020 | Cellular Component | membrane | Interproscan |
| GO:0042058 | Biological Process | regulation of epidermal growth factor receptor signaling pathway | Interproscan |
| GO:0042274 | Biological Process | ribosomal small subunit biogenesis | Interproscan |
| GO:0050708 | Biological Process | regulation of protein secretion | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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