Gene detail

Detailed information of pred2_00144.1 in Architeuthis dux Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
pred2_00144.1	RAS GTPASE-ACTIVATING PROTEINS	Sc3x4tf_213	3037012	3107317	+

Gene Structure

More details in Jbrowse Sequence

CDS

pred2_00144.1

ATGCTTGTTATTGGTAAAGTTTCCTTACGTAAAGAAGAATTGCACAAATATCATGGCAAAGATCATTGGTTTCCACTCTCTCATGTTGGATCAAGTACAGAAGTGCAGGGCAAAGTCCATGTGGAAATACGGTTTGATGAGTATCTTAACACGGAACCTGAGTCTTTCTCATCCCATCGAATGGTGGTTAGGGTTATTGAATGTCTGGATTTGACAGTGGTCAATGGTGCGTGCAATCCTTATGCTGTTATAACAGTCACATTTGGCAAATCTCGGCACAGGGAGGAAGTCAAGCGAACGAGTGTCAAGAAGAAAACCATTTGTCCACAGTTTGAAGAAACATTTTTCTTTGATCTTGACAAGAGGAACCAAAATGGTGATAGGAACCAATATATCTTTGAAGATTTTCTCAGTGGAGATTTATGTTTATCCTTGTGGCATGATGATACCAAAGTATCACGGGAGATGCTTGGTGGAATGTTTCCTGGTGCTTTTCTTGGGGAGGTGAAGATCCCATTGCGGGATTTAGATCCTAAATCAGTTCACAAAGCATGGTACGCTCCAATAACGTCAAGTGCAGCATATATTTTGGGTGAAATTGTTGAGAATCCACAGAACGCAGCTCAACCATTAATGAAGATTTTTCTACATTATGGAAAATTAGTACCTTTAATTAAAGCTTTAGCTGAAAATGAATTGTCAAAAACATCGGATCCAAATACGATATTCCGAGGAAATACTCTAGTCACTAAAGTAATTGATGAGTTAATGAAACTAGTCGGCCTTCCATACTTACAGGACACCATCAAATCTATAATTGATGAAATTTGTACAGATCATCATTCGTGTGAAATTGATCCCTCAAAATTGAAAGATGCAGAAAACGTCTACACAAATATGGTACATAACAAAGAAGTTCGGTACCAAGTAGTCAGTGGATTTGTATTCCTTCGATTTTTTGCACCTGCAATTTTGGGGCCAAAACTCTTTGATCTGCGGACAAGTACTCAGGAGCATCTGAAGTCATATGTGGAAAAAATGTTCAAATCAATCACTCGATCTGGTTTTGTCTGTCCTCAAGTCATGTGTGAAGTTTTCTACACTCTTAGAGAAGCTGCAAGAAAGCACTTTCCTGGTTTGTACCATTTTCTGTCTTTCTCTCTCATTCTAAAAAGAATATCCTTCATAGATGCCACAACAAATCGTGCTTTAACTCTCATCTCCAAGACTATCCAGGGACTAGGAAACATTGTCAGTTCTCGAACTCACTCGTTTGGATTGAAGGAGGATTATATGGTACCCTTGTTCCAATCTTTATCTGATGAGCAACATGTCGATCAAGTGAAGAAGTTCCTTGATGTCATTTCTTCTGGTTCCAGGGTGTCAGTGCAAGACATTGAAGCCCCAACTATTCTCAAAGAAGGAATGATGATCAAGCGTGCTCAAGGGAGAGGGATGTTTGGATTAAAAAATTTCAAGAGACGATATCTTTGCTTAACCAATCAGAGCCTTTTTTACTCACGGGAAAAAGGAGACGAAATTCTATGCCAGATTCCAATCCATAATATCTGGGCGGTTGAAAAACTCCAAGAAGAATCGTTCAAAATGAAATATATGTTTCAAGTGGTGCAGCCTGAACGAGCTTTGTACATCCAAGCCAATAATTGTGTAGAAGAAAAGGAATGGCTGGAATTATTAAAGCAAGTATGCAATTCCAACAAGAATAGGTTAAAAAAATACCATCCAGCAGCCTACATCGGAAATCACTGGCAATGTTGCAAGAACGCAGAGTGCAATGCAGAAGGCTGCAAACCAGTGTCTGGAGGCATCCAAGTGGCCGAAATCCAGGTAGACAAGATAGATGCTGACCGTGAGGTTGAAAAAATTCATTCCTTATACTTAACCTATATGGATAAACTTGAAACAATGCAAGACGCCTGTGCAAGCCAGGAGGTGTACACTGGAGACAGTGATTTGCCACCCTCAATGCATATCGAAGACACCAAAAGCTGCTTTGTGACGCTGAACAACATCTTATCTTGTGTTATCAAGTTAGAACAAGAACATTTGCAATATAAAAAGATGTTGCAAAAACAGACAGTAATAGGATCATGGAGAAACAACGTTAAAAGAAAATATATGAACCACTGCACCAGCCCTTGCACCTTGCCCCCAACTCTTTCTGGCTTCATTCTCTTGATGTTCCTGAATTTTTGCATTGAACAAAGGAATCAGATACTTGATGCCATGCCCAATAACTCTAGTCTCAGCCTGAGCAATTCCTGCATGCTACTTATAGTTACTGAGCTGGGAGCCGTAAAGACGGAATTGTTTTTCGCAAACAAGAATCAACATCTATCAAGACTTACTCAAGGAATACGAGGCGAGTCTCCGTACTCGTACGAAGAGCGCCTTAAATATTGT

Transcript

pred2_00144.1

ATGCTTGTTATTGGTAAAGTTTCCTTACGTAAAGAAGAATTGCACAAATATCATGGCAAAGATCATTGGTTTCCACTCTCTCATGTTGGATCAAGTACAGAAGTGCAGGGCAAAGTCCATGTGGAAATACGGTTTGATGAGTATCTTAACACGGAACCTGAGTCTTTCTCATCCCATCGAATGGTGGTTAGGGTTATTGAATGTCTGGATTTGACAGTGGTCAATGGTGCGTGCAATCCTTATGCTGTTATAACAGTCACATTTGGCAAATCTCGGCACAGGGAGGAAGTCAAGCGAACGAGTGTCAAGAAGAAAACCATTTGTCCACAGTTTGAAGAAACATTTTTCTTTGATCTTGACAAGAGGAACCAAAATGGTGATAGGAACCAATATATCTTTGAAGATTTTCTCAGTGGAGATTTATGTTTATCCTTGTGGCATGATGATACCAAAGTATCACGGGAGATGCTTGGTGGAATGTTTCCTGGTGCTTTTCTTGGGGAGGTGAAGATCCCATTGCGGGATTTAGATCCTAAATCAGTTCACAAAGCATGGTACGCTCCAATAACGTCAAGTGCAGCATATATTTTGGGTGAAATTGTTGAGAATCCACAGAACGCAGCTCAACCATTAATGAAGATTTTTCTACATTATGGAAAATTAGTACCTTTAATTAAAGCTTTAGCTGAAAATGAATTGTCAAAAACATCGGATCCAAATACGATATTCCGAGGAAATACTCTAGTCACTAAAGTAATTGATGAGTTAATGAAACTAGTCGGCCTTCCATACTTACAGGACACCATCAAATCTATAATTGATGAAATTTGTACAGATCATCATTCGTGTGAAATTGATCCCTCAAAATTGAAAGATGCAGAAAACGTCTACACAAATATGGTACATAACAAAGAAGTTCGGTACCAAGTAGTCAGTGGATTTGTATTCCTTCGATTTTTTGCACCTGCAATTTTGGGGCCAAAACTCTTTGATCTGCGGACAAGTACTCAGGAGCATCTGAAGTCATATGTGGAAAAAATGTTCAAATCAATCACTCGATCTGGTTTTGTCTGTCCTCAAGTCATGTGTGAAGTTTTCTACACTCTTAGAGAAGCTGCAAGAAAGCACTTTCCTGGTTTGTACCATTTTCTGTCTTTCTCTCTCATTCTAAAAAGAATATCCTTCATAGATGCCACAACAAATCGTGCTTTAACTCTCATCTCCAAGACTATCCAGGGACTAGGAAACATTGTCAGTTCTCGAACTCACTCGTTTGGATTGAAGGAGGATTATATGGTACCCTTGTTCCAATCTTTATCTGATGAGCAACATGTCGATCAAGTGAAGAAGTTCCTTGATGTCATTTCTTCTGGTTCCAGGGTGTCAGTGCAAGACATTGAAGCCCCAACTATTCTCAAAGAAGGAATGATGATCAAGCGTGCTCAAGGGAGAGGGATGTTTGGATTAAAAAATTTCAAGAGACGATATCTTTGCTTAACCAATCAGAGCCTTTTTTACTCACGGGAAAAAGGAGACGAAATTCTATGCCAGATTCCAATCCATAATATCTGGGCGGTTGAAAAACTCCAAGAAGAATCGTTCAAAATGAAATATATGTTTCAAGTGGTGCAGCCTGAACGAGCTTTGTACATCCAAGCCAATAATTGTGTAGAAGAAAAGGAATGGCTGGAATTATTAAAGCAAGTATGCAATTCCAACAAGAATAGGTTAAAAAAATACCATCCAGCAGCCTACATCGGAAATCACTGGCAATGTTGCAAGAACGCAGAGTGCAATGCAGAAGGCTGCAAACCAGTGTCTGGAGGCATCCAAGTGGCCGAAATCCAGGTAGACAAGATAGATGCTGACCGTGAGGTTGAAAAAATTCATTCCTTATACTTAACCTATATGGATAAACTTGAAACAATGCAAGACGCCTGTGCAAGCCAGGAGGTGTACACTGGAGACAGTGATTTGCCACCCTCAATGCATATCGAAGACACCAAAAGCTGCTTTGTGACGCTGAACAACATCTTATCTTGTGTTATCAAGTTAGAACAAGAACATTTGCAATATAAAAAGATGTTGCAAAAACAGACAGTAATAGGATCATGgagaaacaacgttaaaagaaaatatatgaaccactgcaccagcccttgcaccttgcccccaactctttctggcttcattctcttgatgttcctgaatttttgcattgaacaaaggaatcagatacttgatgccatgcccaataactctagtctcagcctgagcaattcctgcatgCTACTTATAGTTACTGAGCTGGGAGCCGTAAAGACGGAATTGTTTTTCGCAAACAAGAATCAACATCTATCAAGACTtactcaaggaaTACGAGGCGAGTCTCCGTACTCGTACGAAGAGCGCCTTAAATATTGTTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00168	C2	C2 domain	Domain	Interproscan
PF00169	PH	PH domain	Domain	Interproscan
PF00616	RasGAP	GTPase-activator protein for Ras-like GTPase	Family	Interproscan
PF00779	BTK	BTK motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000008	Domain	C2 domain	Interproscan
IPR001562	Conserved_site	Zinc finger, Btk motif	Interproscan
IPR001849	Domain	Pleckstrin homology domain	Interproscan
IPR001936	Domain	Ras GTPase-activating domain	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR023152	Conserved_site	Ras GTPase-activating protein, conserved site	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR039360	Family	Ras GTPase-activating protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10194	RAS GTPASE-ACTIVATING PROTEINS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0035556	Biological Process	intracellular signal transduction	Interproscan
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-