| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| pred2_00004.1 | TETRATRICOPEPTIDE-LIKE HELICAL | Sc3x4tf_575 | 117698 | 137035 | + |
| CDS | |||||
| pred2_00004.1 | |||||
| Transcript |
| pred2_00004.1 |
| Protein |
| pred2_00004.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08424 | NRDE-2 | NRDE-2, necessary for RNA interference | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013633 | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13471 | TETRATRICOPEPTIDE-LIKE HELICAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0031048 | Biological Process | regulatory ncRNA-mediated heterochromatin formation | Interproscan |
| GO:0071013 | Cellular Component | catalytic step 2 spliceosome | Interproscan |
| GO:1902369 | Biological Process | negative regulation of RNA catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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