Detailed information of mRNA.BJAM.scaffold9761.20915 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold9761.20915TRANSCRIPTION ELONGATION FACTOR SPT6scaffold97614848073839-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14632SPT6_acidicAcidic N-terminal SPT6FamilyInterproscan
PF14641HTH_44Helix-turn-helix DNA-binding domain of SPT6DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR017072FamilyTranscription elongation factor Spt6Interproscan
IPR023319Homologous_superfamilyTex-like protein, HTH domain superfamilyInterproscan
IPR023323Homologous_superfamilyTex-like domain superfamilyInterproscan
IPR028083DomainSpt6 acidic, N-terminal domainInterproscan
IPR028088DomainHelix-turn-helix DNA-binding domain of Spt6Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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