Gene detail

Detailed information of mRNA.BJAM.scaffold955.5982 in Bathynomus jamesi Gene info

Gene ID	Annotation	Contig	Start	End	Strand
mRNA.BJAM.scaffold955.5982	JNK/SAPK-ASSOCIATED PROTEIN	scaffold955	670524	688627	+

Gene Structure

More details in Jbrowse Sequence

CDS

mRNA.BJAM.scaffold955.5982

ATGAAACGTTTCCAAAACACTCTCGCCAAAGAAATGCTCCAGACCATTAACAGCATTGTGGGTGAATCTGTTGACGGGGAAAGCCTGGAAGAGCATCCCGCTCTAGGGGCGCCTCTGACTCCCGGACCTTCTTCTGTCCCCTCCGGCAGTTCTTCTGAGAAGTTGCAGCAACGCAGGGCGAGCGAACGGCGCGAGCAGTACAAGCAAGTGCGGGCGCACGTCAAGAAGGATGACGGGCGCATGCAGGCTTACGGGTGGTCCCTTCCCGCCAAAACGGGGCAAGCCCCCGGACAACAGAGGGCTATAGAGGGATCCCAGGGGACCACACAAACACAGACGCCGAGTAGGAGCTCTCACGTACCGGTCCCAGTACCAGTTTACTGCCGACCGTTGATGGAGAAAGAACCTGGCATGAAGATTTGGTGTGCTGCGGGTGTTAATCTAACTGGAGGAAGAACCAAAGATGGAGGCAGTATCGTCGGGGCTTCTGTTTTCTACAGTGGGAAACCCCCTGAAGATGAAGAAGCCGCAGCGATCAATGAATCTGTGAAGGATGAGATAGATCAAATAGACAGGGAACTAAAAGACAACGAGAAAGACCGAAGGGAAGGAGAGTCTCTGGAGCAGTCCCTTTCATCTCTCGTCTGGATTTGTACATCGACGCATTCTATCAGCAAAGTGACCGTCATCGATGCCAATAATCCGGCAGACATTTTGGAGTCCTTCCACGTGTGTTCGTCGCATCTTTTGTGCATCGCCAGTGTTCCAGGCGCGAAAGAGTCTGATTACTCCATCGACGAAGACATGAACAAACTTGTCGAAGAATCACAGCAAAATCAACAACAACAACAGCAGCAACAGCAACAGCCCTCCCCAGAAGGCTCCTCGAGTAACGTTGCCTCCGACACCAAAGGTAAAGAGGATCCCGCGCTATCCGCTTCCGTAGGCATTCTAGCCTTCATCAGTTGCGGTACTGGCACTGAGACCAGTAACGAAGCGGTGCCAAGTTCTCCATCGGAGAAGGAGAATGAAGAAATTACTCCTGTCCTGCGCAAAGAAATTATTGAGACAACGGATCCAGATCAAGACAGCGACAGAGCGGAGGTGGAAAGTAATGCGAGTGACGTACCAATGAGGAGGTTACTCAAGGACCCTGAAGGCGTAATCAAAGATGGGGTCGAGAAAGACGTTGAAACTTCTCCAGATACGAGCGTGGTGCGAGAAGAGGTGGAGAAGATGTCTTCCGTTCTGGCCACCATGTGGCTTGGGTCGCAAAGCGGCTCCATTTACGTACATTCCGCTGTGAGACAGTGGAAGCGATGTCTCCATTCCATTAAACTCAAGGACTCTGTGCTCTCCATTGTGCATATAGGGGGCCGAGTGTTAGCGGCCTTAGCAGATGGTACGGTAGCCATCTTTCATAGGAAAGACGACTGCCAGTGGGACCTCACAAATTACCATCTGTTGGATTTGGGAAGGCCACACCACTCCATACGATGCATGCACGTGGTACACAATAAAGTATGGTGCGGTTACAGAAACAAGGTTCACGTGGTCAATCCTAAGACAATGTGTGTTGAGAAAACATTCGACGCCCATCCTAGGAAAGAATCCCAAGTGCGACAGATGTCGTGGATTGGGGACGGTGTGTGGGTGAGTATTCGGTTGGATTCCACACTACGACTCTATCATGCCCACACACATCAACATCTTCAAGACGTTGATATAGAACCCTACGTTTCAAAAATGCTTGGAACTGGAAAATTAGGTTTCTCCTTCGTCAGAATAACTGCCCTTTTGATATCCTCGAATCGGTTGTGGATTGGAACTGGAAATGGAGTCATTATTTCAGTTCCTCTGTCAGAAAGTACGAGTGGCAGCGGTGGTACCAGCAGCAGCGCAGCTGCTCTGTGTTCGAGTTTAACCAGCATTCCCCCTATGGGAGGTCCCCGGATGCCCGGGGGAGTTGTGAGGGTGTACGCGGACAGTCAGGATCACATGACAGCTGGATCCTTCATTCCCTATTGTTCTATGGCGCAGGCGCAACTCTCTTTCCACGGCCATAGAGACGCTGTTAAGTTCTTCGTTGCGGTTCCTGGCTTAGGAGGGTATCCTGCCTTTACAGCCGTCCAGTCAGCCATGTCGGCAGCCTCCATGGATACGGAGGTCGAGGAAGAGTCCTCAGCTAAACCCAAGAGCATGCTAGTCATATCCGGCGGAGAAGGTTACATCGATTTCAGAATAGACGTAACATTTGTATTCCTTGCTTACTACCCTGTAGCCGAAGAGAGAGAAGAAGATAGAGACACTGCCAGCCATCTCTTGGTGTGGCACTTGCCTATCGAAGATAATCTGTCCGATCTCAGTGGTGTGTCCACTAACCCCACACCCGACACCAGTCTGTCCATAGTCAATGGGCACACCTAG

Transcript

mRNA.BJAM.scaffold955.5982

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19056	WD40_2	WD40 repeated domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR039911	Family	JNK-interacting protein 3/4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13886	JNK/SAPK-ASSOCIATED PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005078	Molecular Function	MAP-kinase scaffold activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0008432	Molecular Function	JUN kinase binding	Interproscan
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0019894	Molecular Function	kinesin binding	Interproscan
GO:0030159	Molecular Function	signaling receptor complex adaptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-