Detailed information of mRNA.BJAM.scaffold7800.19576 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold7800.19576ATPASES OF THE PP SUPERFAMILY-RELATEDscaffold7800122395152726+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01171ATP_bind_3PP-loop familyFamilyInterproscan
PF16503zn-ribbon_14Zinc-ribbonFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000541FamilyCytoplasmic tRNA 2-thiolation protein 1Interproscan
IPR011063DomaintRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminalInterproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR020554Conserved_siteUncharacterised protein family UPF0021, conserved siteInterproscan
IPR032442DomainCytoplasmic tRNA 2-thiolation protein 1, C-terminalInterproscan
IPR035107FamilytRNA thiolation protein, TtcA/Ctu1 typeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11807ATPASES OF THE PP SUPERFAMILY-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000049Molecular FunctiontRNA bindingInterproscan
GO:0002098Biological ProcesstRNA wobble uridine modificationInterproscan
GO:0002143Biological ProcesstRNA wobble position uridine thiolationInterproscan
GO:0002144Cellular Componentcytosolic tRNA wobble base thiouridylase complexInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0034227Biological ProcesstRNA thio-modificationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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