| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| mRNA.BJAM.scaffold620.4308 | - | scaffold620 | 704413 | 705538 | - |
| CDS | |||||
| mRNA.BJAM.scaffold620.4308 | |||||
| Transcript |
| mRNA.BJAM.scaffold620.4308 |
| Protein |
| mRNA.BJAM.scaffold620.4308 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF09416 | UPF1_Zn_bind | RNA helicase (UPF2 interacting domain) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR018999 | Domain | RNA helicase UPF1, Cys/His rich zinc-binding domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| - | - | - |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000184 | Biological Process | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003724 | Molecular Function | RNA helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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