Detailed information of mRNA.BJAM.scaffold5674.17398 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold5674.17398-scaffold5674246472253086+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF01522Polysacc_deac_1Polysaccharide deacetylaseFamilyInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR002509DomainNodB homology domainInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR011330Homologous_superfamilyGlycoside hydrolase/deacetylase, beta/alpha-barrelInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR052740FamilyCarbohydrate Esterase 4Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR45985-Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0016810Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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