Detailed information of mRNA.BJAM.scaffold5193.16739 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold5193.16739ATP-DEPENDENT RNA HELICASEscaffold5193136536195019+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00107ADH_zinc_NZinc-binding dehydrogenaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF07717OB_NTP_bindOligonucleotide/oligosaccharide-binding (OB)-foldDomainInterproscan
PF08240ADH_NAlcohol dehydrogenase GroES-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR011032Homologous_superfamilyGroES-like superfamilyInterproscan
IPR011709DomainDEAD-box helicase, OB foldInterproscan
IPR013149DomainAlcohol dehydrogenase-like, C-terminalInterproscan
IPR013154DomainAlcohol dehydrogenase-like, N-terminalInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR020843DomainPolyketide synthase, enoylreductase domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR18934ATP-DEPENDENT RNA HELICASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003725Molecular Functiondouble-stranded RNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005622Cellular Componentintracellular anatomical structureInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0045943Biological Processpositive regulation of transcription by RNA polymerase IInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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