Gene detail

Detailed information of mRNA.BJAM.scaffold4386.15608 in Bathynomus jamesi Gene info

Gene ID	Annotation	Contig	Start	End	Strand
mRNA.BJAM.scaffold4386.15608	SEC63 DOMAIN-CONTAINING	scaffold4386	331830	388312	+

Gene Structure

More details in Jbrowse Sequence

CDS

mRNA.BJAM.scaffold4386.15608

ATGGCAGGACAAAAATTTGAATATGATGAATCAGGATCAACATTTTTGTACTTCTTAATTAGTTTTCTTGGATTAGTTTTAGTTCCTTGTACATTTTACTTCTGGCCTGCTGATGCTGCTCAAGAAGACCCCAAAAAGCAGAAGGATACCTGTCACTGTGAAGGTTGTCTCAAAAAAGAAACAAGGTTAAAGAAACCAGAAAAATGGAAAGGAATGAAAAAGAATTTTCAACGTTTTATTCTTCTTATTGGGTGGGGCTTTATGGCATTTTTAATCTACAAAGTTCAAGAGTTTGACTATGAATATGCAAATTTTGATCCTTATGATATACTTGGAGTAAGCATGCAAGCTTCACAAGCTGACATCAAGAAATCATATCGAAAACTCTCGCTTATCTACCATCCAGACAAACCCACAGGAGATGAGAGAAAGTTTATGAAGCTGAACAAAGCTTACCAGGCCCTGACTGATGATACTGCTCGCAGAAACTATGAGCTGTATGGAAATCCTGATGGGCCAGGAGCTATGCATTTTGGAATAGCTTTGCCCTCTTGGATAATTGAAAAAGAAAATTCACTTTGGGTTTTGGGTCTTTATGGTCTTGTATTCATGATTGGTTTACCCACTGTAGTCGCAATTTGGTGGTATCGGTCATCCAAGTTCTCCAATGATCAAGTTCTTGTTGATACAACCCAGCTTTACTGTTACTTCTTCCACAAAACTCCGCAGATGGTGTTAAAGAGAGCTCTTATGGTCCTCGCTGCCTCGCTGGAATTTGAAAAAGGACATAATCCAGAAATTATGGAGCGCCCTTCTGACAATGTGGAGCTTCCTTCTCTCATTAAACAACTCCCCAATTTGGGGGAAAAGAACAAGGAACGGCCACTCTGCTTCCCGTATTCCATCAAAGCAAGAGCGCTCCTTCACGCTCATCTTGCGAGGATGTCACTGAAGGAAGATACACTTGATCAGGATAGGCTTTATATCCTAAAATTGGCTCCGACTTTAATCAATGAGATGGTAACGTGCGTTTCCCAATTAATTATGCTGGCTCACGCTGGAAGGATATCTCGGCTTCCTTCACTTGACACTATTGAAGCAACGATGAAACTCTCCCCTCACATAGTGCAAGCCTTAAATGAGGGGAAGAGCTCTCTACTTCAGCTCCCTCATGTCACCGAGGAGACGCTGAGACATTTTGTAAGTAAAAAGAAATCTGTTAAGACAATTTCTCAGTTCGTGTCGCTTCCCGCCGAAGAACGGAGGCAAGTTCTTCGAACGCTTTCTGACGATCAGTACGATGATATAATGAAGGTCTGCACTTCTTTCCCTCATTTGGAAATGTTCGTCAACTATGAAGTTGTTGACGATGATGACACAGGAGTGTTCACCGCAGGAGCAATCGTGACCGTGACAGTGAGTCTCCGGCGCACTCCTCTCGAGGAGTTCTTCTATGAGAAACACGTAGACTCGAAACGTAGCCAAGAAGACTTTCCCGAAGAGGAAACGAGGGAGAAAGAAACGCGGTCTAGTAAGAGCTCGGGATGGAAGAGGCCTCAAGCGAAGAAGGGAAAACCGAATAAGAAGAAGCAAATGACGCAGCAAAAAGGAAGAAAAGAAGAAAAACACAAAGAAATAGAAACAAGAAAAACGAACGAAAGGGATAGGAAACAGGAACCCAAAAAAGCAAAATTAGAACGTGTGGAAGACGTTGATAACGAGAGTGAAGAGGATGACTCAGCATCGCACTCTGACGAGTCGCAGGCCGATGAGGCAGATACGGAGTCGCACAGAGACGATAAGAATGGCATGGATGAGGATGCGGAGTGGGAAAAATTCCAGCGTGGTTTGACCAAAAGAGAGAAAGTACTTGAAGGTAAATCCAAACTCTCTCATTCCGTTCACTCTCCCCATTTCTCAGAAGATAAACAAGAATATTGGTGGACGTACGTCTGCGATAGGAAAAAGCACATGCTGATCACTGCCCCTTATCAGGTTACCAATTTGTCTTCTGAAGAGGAGGTGCAGTTGAAGTTCACAGCTCCGATGAAGCCTGGCATTTACACGTTCCAAGTGTGCGTCCGCTCCGACTCTTACTTAGGTTTCGACGTTAACGAGGATATTAAACTGGACGTGAAAGAGGAGAGAGAGATCCCGACGGCGCACCCTCAGTGGGAGGAGTTCTCGAGCAACGACGAGGATGACAAGGGAAAAGGGATCAGCAACGAGGACGAGAGCGAGTTTACTACTGACGAGGAAGTGACTGAAGATAGCGATTAA

Transcript

mRNA.BJAM.scaffold4386.15608

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00226	DnaJ	DnaJ domain	Domain	Interproscan
PF02889	Sec63	Sec63 Brl domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR004179	Domain	Sec63 domain	Interproscan
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR018253	Conserved_site	DnaJ domain, conserved site	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24075	SEC63 DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0006614	Biological Process	SRP-dependent cotranslational protein targeting to membrane	Interproscan
GO:0006620	Biological Process	post-translational protein targeting to endoplasmic reticulum membrane	Interproscan
GO:0008320	Molecular Function	protein transmembrane transporter activity	Interproscan
GO:0031207	Cellular Component	Sec62/Sec63 complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-