| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| mRNA.BJAM.scaffold16393.23166 | DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2 | scaffold16393 | 34689 | 36844 | - |
| CDS | |||||
| mRNA.BJAM.scaffold16393.23166 | |||||
| Transcript |
| mRNA.BJAM.scaffold16393.23166 |
| Protein |
| mRNA.BJAM.scaffold16393.23166 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13423 | UCH_1 | Ubiquitin carboxyl-terminal hydrolase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR028881 | Domain | PAN2, UCH domain | Interproscan |
| IPR028889 | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR050785 | Family | PAN2-PAN3 complex catalytic subunit | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15728 | DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000289 | Biological Process | nuclear-transcribed mRNA poly(A) tail shortening | Interproscan |
| GO:0000932 | Cellular Component | P-body | Interproscan |
| GO:0004535 | Molecular Function | poly(A)-specific ribonuclease activity | Interproscan |
| GO:0031251 | Cellular Component | PAN complex | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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