Detailed information of mRNA.BJAM.scaffold12849.22426 in Bathynomus jamesi Gene info
Gene IDAnnotationContigStartEndStrand
mRNA.BJAM.scaffold12849.22426CONTACTIN 5scaffold128491632974013-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008EGFEGF-like domainDomainInterproscan
PF00047igImmunoglobulin domainDomainInterproscan
PF00052Laminin_BLaminin B (Domain IV)DomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000034DomainLaminin IVInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013151DomainImmunoglobulinInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050958FamilyCell Adhesion and Cytoskeletal OrganizationInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45080CONTACTIN 5Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP