| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| mRNA.BJAM.TU.9412 | SCAFFOLD ATTACHMENT FACTOR B-RELATED | scaffold1822 | 429905 | 445756 | + |
| CDS | |||||
| mRNA.BJAM.TU.9412 | |||||
| Transcript |
| mRNA.BJAM.TU.9412 |
| Protein |
| mRNA.BJAM.TU.9412 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR051738 | Family | Scaffold Attachment Factor and Modulators | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15683 | SCAFFOLD ATTACHMENT FACTOR B-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0043565 | Molecular Function | sequence-specific DNA binding | Interproscan |
| GO:0050684 | Biological Process | regulation of mRNA processing | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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