Gene ID | Annotation | Contig | Start | End | Strand |
---|---|---|---|---|---|
mRNA.BJAM.TU.2796 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 | scaffold372 | 878140 | 924153 | - |
CDS | |||||
mRNA.BJAM.TU.2796 | |||||
Transcript |
mRNA.BJAM.TU.2796 |
Protein |
mRNA.BJAM.TU.2796 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF06003 | SMN_Tudor | Survival motor neuron protein (SMN), Tudor domain | Domain | Interproscan |
PF20635 | SMN_YG-box | Survival Motor Neuron, YG-box | Domain | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR002999 | Domain | Tudor domain | Interproscan |
IPR010304 | Domain | Survival motor neuron, Tudor domain | Interproscan |
IPR040424 | Family | SMN complex subunit Smn1 | Interproscan |
IPR047313 | Domain | Survival motor neuron protein, C-terminal oligomerization domain | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR39267 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003723 | Molecular Function | RNA binding | Interproscan |
GO:0005634 | Cellular Component | nucleus | Interproscan |
GO:0005737 | Cellular Component | cytoplasm | Interproscan |
GO:0006397 | Biological Process | mRNA processing | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |