| Gene ID | Annotation | Contig | Start | End | Strand |
|---|---|---|---|---|---|
| mRNA.BJAM.TU.16187 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA | scaffold4797 | 97004 | 291961 | + |
| CDS | |||||
| mRNA.BJAM.TU.16187 | |||||
| Transcript |
| mRNA.BJAM.TU.16187 |
| Protein |
| mRNA.BJAM.TU.16187 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | bHLH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00010 | HLH | Helix-loop-helix DNA-binding domain | Domain | Interproscan |
| PF08778 | HIF-1a_CTAD | HIF-1 alpha C terminal transactivation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011598 | Domain | Myc-type, basic helix-loop-helix (bHLH) domain | Interproscan |
| IPR014887 | Domain | HIF-1 alpha, C-terminal transactivation domain | Interproscan |
| IPR036638 | Homologous_superfamily | Helix-loop-helix DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR23043 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000977 | Molecular Function | RNA polymerase II transcription regulatory region sequence-specific DNA binding | Interproscan |
| GO:0000981 | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0046983 | Molecular Function | protein dimerization activity | Interproscan |
| GO:0071456 | Biological Process | cellular response to hypoxia | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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