Detailed information of gene28222.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene28222.t1-chr91089956310906829-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan
PF09092Lyase_NLyase, N terminalDomainInterproscan
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR015176DomainLyase, N-terminalInterproscan
IPR015177DomainLyase, catalyticInterproscan
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR37322-Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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