Detailed information of gene27740.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene27740.t1IONOTROPIC GLUTAMATE RECEPTORchr929386622955794+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF00497SBP_bac_3Bacterial extracellular solute-binding proteins, family 3DomainInterproscan
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF10562CaM_bdg_C0Calmodulin-binding domain C0 of NMDA receptor NR1 subunitDomainInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR001508FamilyIonotropic glutamate receptor, metazoaInterproscan
IPR001638DomainSolute-binding protein family 3/N-terminal domain of MltFInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR018882DomainCalmodulin-binding domain C0, NMDA receptor, NR1 subunitInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan
IPR049872DomainGlutamate [NMDA] receptor subunit 1-like, ligand-binding domainInterproscan
IPR049873DomainGlutamate [NMDA] receptor subunit 1-like, N-terminal LIVBP-like domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP