Gene detail

Detailed information of gene27532.t1 in Actinoscyphia liui Gene info

Gene ID	Annotation	Chromosome	Start	End	Strand
gene27532.t1	DISCS LARGE	chr8	24552898	24562524	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

gene27532.t1

GCTTAGATTTAGTCAGTTATGCCGATCATGTTATACGAAGTAGAGTTTACAAACTTTTATCAACTCTACTGTACTGACGACCAAGACACTGAATGATATGGTGTATGCAGAGTTGTGGCAGTTAAAAGTTTTTCGTTATAATGTTTATATTATGTCATGAAATTTGAACAAAGTTTATAACGTCATGAAGAAGACAGTAGGAAGACAAGGAGTTGCTCTAGCTTCACATCGAGACGACCGTAGAAACAGACACCTTAAAACTGAACAATTCAAGTATGGCTCACAACCTAAAAAGTCAACTCAAGTAAAAACAAAGAAGAAGAAAAATTATAAACGCAAAGATAAAGGTCAAGATAATCTTGCTTATGATGAAGCGTCGACAGATTCAGACTCCTCCATTGAAGAACTCCAGCAAAGGGAGATACTCATTACTATAGTAACAGGATCACGTGGTAAGTACCTTCACGTTGATTGGTCTAGCTATTCAGACTCCTCCATTGAAGAACTCCAGGATAGGGAGATACTCATTACTATAGTAACAGGATCACGTGGTGTTCTTGGTGACTTCGGTTTTGAGCTGATGGGTGGCAATAATGACCCAGATCTGGCGGAATACAACGATACTGGAATATACATTCAAGACGTCACTCCAGGATCTGATGTAGAGAAAACCCTAGACGGTGGTGATCAGATACTCAAAATTGGTGGACATTGTGTACTAGATGTACCTCTGCATCACGCGCTGAATTTAATACGAGCCGCGGATTCTAGAGTAGTCGTTAATATATTAAAACATCCAGATAATCCGATGAGTCCAACAATCCCAGACGACTCAGACGATGACAGTGGGCCTGAATTAGACGAAGATGAATTAAATGACGAAATTAGTTCAATCCTTTCTAGAAATTCACAGGGTGTTAATACTGCGGCATCTACAATGATGGTCGATGAGACTAACGATGGCGAGGAAGTAGATGTGATATTTATGAGTGGAAGGCCAGGTCATTTAGATGATTTAGACTTTGAATTTGCCGGTGGAAAAGATGCGCCTTATGTACCAAAAAACGGTGGAATATTCATAACCAGTGTCAAGTTTGGAAGTATATTAGAGGAAATCATTTCAACAGGAGATAAAATAATCAGACTTGAAGGTATTGACATCACCAATGTTCCACGGTTCACAGTGATAAACCTTATTCGTGCTTCACATGGTCAAGCAAGGATGACTGTAAGAAAAGCTAACAAACAGCAGGTAAATTTCAGTGCATTTGACGATGTAGAAGTCCGTGTGAACGTTTTAGGAGCAAAAGATGAGATTATCGTGGAGATCAAAACAGGACCTAAAGGTCGTCGCGGTCAGCTAGGGTTTAAGGTCACAGGAGGGCGAGATAAACCGTGCAAGCCTGGTGACCCTGGGGTGTTTATCAAAGAAGTAAAACCTGGATCCAAATTAGAGAAAATACTCAAACCTGGCGATAAGTTACTCAAGGTCGCAGGTAAAAACGTCACCAATTCAACACAGGGTCAAGTTCTGGATGTGATAAAAGCCGCTGACCGCAGAGTATTGCTGCATATCAAGAGAAGTTCTACAGATCCAGTAGACAAAGTCAAGAAGACGATAAGTGAATTGTTTGAGCCTTCACAGTTAGAAGAGTTTCTTGCAGCATTTGAGGTCTATTGCGACGATCGTGATCGAAAGATGGATATCTCTCGTCTACCAAGACTGTGTCGTGCTTTAGGGTTTAACTTGACAGAACAAGACTTTGAGCATATGACCACTCGCCATGAAAATGGAATTGGAAGAATCGCATTCCAGGAATTTGTGCACATGATAGGTGAATTTTCAAGTATACGACAAAAAGACAGGGACATTCTAGAAGCATTTGAGATTTTCGATCGTGAATGCCATGGTTTCTTTCTTCTGGAGGATCTCAAAGCTGCTTTTAGATGTATGCCAGGATACTCGACTTTAACTGATGAAGAGATGGATCACATTACGAAAACAGCTGATTCTAATGGAGACGGTAAAGTCTACTACCAAGATTTTAAGGAACTCGTTCTTCCAATATTTCACAAATATTGAAGTTTTCGTCAGTGGAATATTAACGACTTCCATCAATGAACGACAATAAGTACAAAAAATGTAAATGAATGAATGAATAACCTTTATTTAAACAGGGTTGTCCTTTCAGTGTGTATAACACGCTGTTATCAATAGGAGCCCTAAATGGAAACTACAGTTACTGTAGCAAGTCAACTAGTATGGGCTGCATACTGAAATGTAAATGTAAATCTGTAACACCTTATAAATGGAAACTAGCAAGTAAACTAGTATGGGCTGCATACTAAATGTAAATGTAAATCTGTGACACCTTATAAAAGGAGTAATACTAGCTTCTAGTTTACCGACGTCGACGTTTTGAGCTTTAGCTCTTCGTCGATCGTGCGATCGTGCTACGTTATTGCAGATTTACATTTATTCACCGATGAGCTAGTAAAAACTCATCCTGCACATGCTTATTAATTGAGACTCGAATGAACCATTTCGTTTGTATAATACTCTACGGCTATGTAGCTTTGTAATAAAATAATAAGCTAATACGATGCAATGTCTTGGGTTGTCACTCAGCACTCTAATTCAATATTTAATCTTTTTATGAAGCAGATAATCTCTCTATGGTCATCGCCCAGGGGCCGATCTAGGGGAGGGGTGCAGGGGGTGGGCACGACTTTTGTGCGCTTTTCATCTGACTGGTGTCCAGTGAGACCACAGGTAGCCCAAGCTATGCGCTTTTGGCGATTTTTTTGGTGTCAGTAAAATGATTGAAATAATTAAAAAAAAGTTGACCTATAAGTTTG

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR050614	Family	Synaptic Scaffolding LAP/MAGUK Families	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23119	DISCS LARGE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0009790	Biological Process	embryo development	Interproscan
GO:0016323	Cellular Component	basolateral plasma membrane	Interproscan
GO:0030054	Cellular Component	cell junction	Interproscan
GO:0043113	Biological Process	receptor clustering	Interproscan
GO:0045197	Biological Process	establishment or maintenance of epithelial cell apical/basal polarity	Interproscan
GO:0097120	Biological Process	receptor localization to synapse	Interproscan
GO:0098609	Biological Process	cell-cell adhesion	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-