Gene ID | Annotation | Chromosome | Start | End | Strand |
---|---|---|---|---|---|
gene25129.t1 | RNA-DEPENDENT RNA POLYMERASE | chr7 | 21999526 | 22016850 | - |
CDS | |||||
gene25129.t1 | |||||
Transcript |
gene25129.t1 |
Protein |
gene25129.t1 |
Gene family | Subfamily |
---|---|
- | - |
Pfam accession | Pfam name | Description | Type | Source |
---|---|---|---|---|
PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
PF01909 | NTP_transf_2 | Nucleotidyltransferase domain | Domain | Interproscan |
PF05183 | RdRP | RNA dependent RNA polymerase | Family | Interproscan |
InterPro term | Type | Description | Source |
---|---|---|---|
IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
IPR002934 | Domain | Polymerase, nucleotidyl transferase domain | Interproscan |
IPR007855 | Family | RNA-dependent RNA polymerase, eukaryotic-type | Interproscan |
IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
IPR043519 | Homologous_superfamily | Nucleotidyltransferase superfamily | Interproscan |
PANTHER term | Description | Source |
---|---|---|
PTHR23079 | RNA-DEPENDENT RNA POLYMERASE | Interproscan |
GO terms | Category | Description | Source |
---|---|---|---|
GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
GO:0003968 | Molecular Function | RNA-dependent RNA polymerase activity | Interproscan |
GO:0005524 | Molecular Function | ATP binding | Interproscan |
GO:0016779 | Molecular Function | nucleotidyltransferase activity | Interproscan |
GO:0030422 | Biological Process | siRNA processing | Interproscan |
GO:0031380 | Cellular Component | nuclear RNA-directed RNA polymerase complex | Interproscan |
KO | Enzyme | Enzyme ID | pathway | mapID | Source |
---|---|---|---|---|---|
- | - | - | - | - | - |