Detailed information of gene25129.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene25129.t1RNA-DEPENDENT RNA POLYMERASEchr72199952622016850-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF01909NTP_transf_2Nucleotidyltransferase domainDomainInterproscan
PF05183RdRPRNA dependent RNA polymeraseFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR002934DomainPolymerase, nucleotidyl transferase domainInterproscan
IPR007855FamilyRNA-dependent RNA polymerase, eukaryotic-typeInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23079RNA-DEPENDENT RNA POLYMERASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003968Molecular FunctionRNA-dependent RNA polymerase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0031380Cellular Componentnuclear RNA-directed RNA polymerase complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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