| Gene ID | Annotation | Chromosome | Start | End | Strand |
|---|---|---|---|---|---|
| gene22562.t2 | CONTACTIN 5 | chr6 | 30538872 | 30613559 | - |
| CDS | |||||
| gene22562.t2 | |||||
| Transcript |
| gene22562.t2 |
| Protein |
| gene22562.t2 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00041 | fn3 | Fibronectin type III domain | Domain | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF00102 | Y_phosphatase | Protein-tyrosine phosphatase | Domain | Interproscan |
| PF00754 | F5_F8_type_C | F5/8 type C domain | Domain | Interproscan |
| PF04886 | PT | PT repeat | Repeat | Interproscan |
| PF07679 | I-set | Immunoglobulin I-set domain | Domain | Interproscan |
| PF13927 | Ig_3 | Immunoglobulin domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000242 | Domain | Tyrosine-specific protein phosphatase, PTPase domain | Interproscan |
| IPR000387 | Domain | Tyrosine-specific protein phosphatases domain | Interproscan |
| IPR000421 | Domain | Coagulation factor 5/8 C-terminal domain | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR003595 | Domain | Protein-tyrosine phosphatase, catalytic | Interproscan |
| IPR003598 | Domain | Immunoglobulin subtype 2 | Interproscan |
| IPR003599 | Domain | Immunoglobulin subtype | Interproscan |
| IPR003961 | Domain | Fibronectin type III | Interproscan |
| IPR006970 | Repeat | PT repeat | Interproscan |
| IPR007110 | Domain | Immunoglobulin-like domain | Interproscan |
| IPR008979 | Homologous_superfamily | Galactose-binding-like domain superfamily | Interproscan |
| IPR013098 | Domain | Immunoglobulin I-set | Interproscan |
| IPR013106 | Domain | Immunoglobulin V-set domain | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR016130 | Active_site | Protein-tyrosine phosphatase, active site | Interproscan |
| IPR029021 | Homologous_superfamily | Protein-tyrosine phosphatase-like | Interproscan |
| IPR036116 | Homologous_superfamily | Fibronectin type III superfamily | Interproscan |
| IPR036179 | Homologous_superfamily | Immunoglobulin-like domain superfamily | Interproscan |
| IPR050958 | Family | Cell Adhesion and Cytoskeletal Organization | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45080 | CONTACTIN 5 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004725 | Molecular Function | protein tyrosine phosphatase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0006470 | Biological Process | protein dephosphorylation | Interproscan |
| GO:0007156 | Biological Process | homophilic cell adhesion via plasma membrane adhesion molecules | Interproscan |
| GO:0016311 | Biological Process | dephosphorylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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