Detailed information of gene21079.t1 in Actinoscyphia liui Gene info
Gene IDAnnotationChromosomeStartEndStrand
gene21079.t1APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.chr625402452665865-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00088TrefoilTrefoil (P-type) domainDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000519DomainP-type trefoil domainInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR017957Conserved_siteP-type trefoil, conserved siteInterproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR044913Homologous_superfamilyP-type trefoil domain superfamilyInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP